RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZKSCAN4Q969J2 545 aaPredicted RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 GANQ9H2C0 597 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 ZSWIM4Q9H7M6 989 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 PICK1Q9NRD5 415 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 PKD2L1Q9P0L9 805 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 EIF2AK2P19525 551 aaKnown RBP21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 STXBP4Q6ZWJ1 553 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 ILDR2Q71H61 639 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 FAM178BQ8IXR5 827 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 ATG4CQ96DT6 458 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 TBC1D22BQ9NU19 505 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 ZNF446Q9NWS9 450 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 GPRC5DQ9NZD1 345 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 OGFRQ9NZT2 677 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 PUF60Q9UHX1 559 aaKnown RBP21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 DUSP10Q9Y6W6 482 aa21.66■■□□□ 1.06
PCDHB11-202ENST00000624887 TLR2O60603 784 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 SERPING1P05155 500 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 SLC9C1Q4G0N8 1177 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 ZC2HC1CQ53FD0 456 aaPredicted RBP21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 PAPD7Q5XG87 772 aaKnown RBP21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 RNF207Q6ZRF8 634 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 C12orf42Q96LP6 360 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 PLCB1Q9NQ66 1216 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 MYH11P35749 1972 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 CLIC2O15247 247 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 CASP4P49662 377 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 ODR4Q5SWX8 454 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 SECISBP2LQ93073 1101 aaKnown RBP21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 WNK4Q96J92 1243 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 RMDN3Q96TC7 470 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 PDCD2LQ9BRP1 358 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 EPC1Q9H2F5 836 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 PXMP2Q9NR77 195 aa21.65■■□□□ 1.06
PCDHB11-202ENST00000624887 RLFQ13129 1914 aa21.64■■□□□ 1.06
PCDHB11-202ENST00000624887 ANO9A1A5B4 782 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 SPDYE4A6NLX3 237 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 LYPLA2O95372 231 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 ZSCAN20P17040 1043 aaPredicted RBP21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 APBA1Q02410 837 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 MAPK7Q13164 816 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 DPY19L2P1Q6NXN4 242 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 SLC35C1Q96A29 364 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 AIPL1Q9NZN9 384 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 DBR1Q9UK59 544 aaKnown RBP21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 PCDHB13Q9Y5F0 798 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 ZHX2Q9Y6X8 837 aa21.64■■□□□ 1.05
PCDHB11-202ENST00000624887 RBAK-RBAKDNI3L0D1 243 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 ENC1O14682 589 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 HIP1RO75146 1068 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 ATP1A1P05023 1023 aaKnown RBP21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 YBX3P16989 372 aaKnown RBP eCLIP21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 QARSP47897 775 aaKnown RBP21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 PRAMEF18Q5VWM3 479 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 PADI6Q6TGC4 694 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 DAW1Q8N136 415 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 REPS2Q8NFH8 660 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 TRPM4Q8TD43 1214 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 BORCS6Q96GS4 357 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 STRA6Q9BX79 667 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 PHIPQ8WWQ0 1821 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 MACROD2A1Z1Q3 448 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 TFRCP02786 760 aaKnown RBP21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 EXOC3L4Q17RC7 722 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 TDRD12Q587J7 1177 aaKnown RBP21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 DCAF17Q5H9S7 520 aaPredicted RBP21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 NSMFQ6X4W1 530 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 MKNK1Q9BUB5 465 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 RNF146Q9NTX7 359 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 ADAMTS5Q9UNA0 930 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 SAMM50Q9Y512 469 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 RIPK3Q9Y572 518 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 SAR1BQ9Y6B6 198 aa21.63■■□□□ 1.05
PCDHB11-202ENST00000624887 COL11A1P12107 1806 aaPredicted RBP21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 CTAGE15A4D2H0 777 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 C19orf81C9J6K1 198 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 PJA2O43164 708 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 SBF1O95248 1867 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 CTAGE8P0CG41 777 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 MYCLP12524 364 aaPredicted RBP21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 PSMC2P35998 433 aaKnown RBP21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 MAGEA1P43355 309 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 OAZ1P54368 228 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 HMGCS2P54868 508 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 DMTNQ08495 405 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 ARHGEF16Q5VV41 709 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 XRRA1Q6P2D8 792 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 HS2ST1Q7LGA3 356 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 CTAGE6Q86UF2 777 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 GPIHBP1Q8IV16 184 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 CTAGE4Q8IX94 777 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 TXLNBQ8N3L3 684 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 PARD6BQ9BYG5 372 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 IKZF4Q9H2S9 585 aa21.62■■□□□ 1.05
PCDHB11-202ENST00000624887 GTPBP10A4D1E9 387 aaKnown RBP21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 PPP1R37O75864 691 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 SLC9A1P19634 815 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 PON1P27169 355 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 RARRES1P49788 294 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms