RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PLA2G4FQ68DD2 849 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 ABHD15Q6UXT9 468 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 STXBP4Q6ZWJ1 553 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 OTUD6AQ7L8S5 288 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 ZNF507Q8TCN5 953 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 CEP63Q96MT8 703 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 TELO2Q9Y4R8 837 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.69■■□□□ 1.38
SPAST-204ENST00000621856 EIF3DO15371 548 aaKnown RBP eCLIP23.68■■□□□ 1.38
SPAST-204ENST00000621856 TPM1P09493 284 aa23.68■■□□□ 1.38
SPAST-204ENST00000621856 UBA1P22314 1058 aaKnown RBP23.68■■□□□ 1.38
SPAST-204ENST00000621856 MAPK7Q13164 816 aa23.68■■□□□ 1.38
SPAST-204ENST00000621856 CCDC112Q8NEF3 446 aa23.68■■□□□ 1.38
SPAST-204ENST00000621856 PARK7Q99497 189 aaKnown RBP23.68■■□□□ 1.38
SPAST-204ENST00000621856 SH2D3AQ9BRG2 576 aa23.68■■□□□ 1.38
SPAST-204ENST00000621856 TIPINQ9BVW5 301 aa23.68■■□□□ 1.38
SPAST-204ENST00000621856 PLXNB2O15031 1838 aa23.68■■□□□ 1.38
SPAST-204ENST00000621856 AKR1B15C9JRZ8 316 aaPredicted RBP23.67■■□□□ 1.38
SPAST-204ENST00000621856 CALUO43852 315 aaPredicted RBP23.67■■□□□ 1.38
SPAST-204ENST00000621856 EDRF1Q3B7T1 1238 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 CCDC40Q4G0X9 1142 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 CCDC60Q8IWA6 550 aaPredicted RBP23.67■■□□□ 1.38
SPAST-204ENST00000621856 MYH9P35579 1960 aaKnown RBP23.67■■□□□ 1.38
SPAST-204ENST00000621856 ZNF862O60290 1169 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 ADKP55263 362 aaKnown RBP23.67■■□□□ 1.38
SPAST-204ENST00000621856 NPEPPSP55786 919 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 RBL2Q08999 1139 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 NEDD9Q14511 834 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 DAW1Q8N136 415 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 TC2NQ8N9U0 490 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 CPLX3Q8WVH0 158 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 TYW1Q9NV66 732 aaKnown RBP23.67■■□□□ 1.38
SPAST-204ENST00000621856 MORF4L1Q9UBU8 362 aa23.67■■□□□ 1.38
SPAST-204ENST00000621856 UBE4BO95155 1302 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 ARID2Q68CP9 1835 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 A0A1W2PQC6 194 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 PDXKO00764 312 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 CETN3O15182 167 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 GNA14O95837 355 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 TGFB3P10600 412 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 HOXD13P35453 343 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 TRIM14Q14142 442 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 MAN2A1Q16706 1144 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 FKBP15Q5T1M5 1219 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 CEP135Q66GS9 1140 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 ANO5Q75V66 913 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 SPTLC3Q9NUV7 552 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 LARSQ9P2J5 1176 aaKnown RBP23.66■■□□□ 1.38
SPAST-204ENST00000621856 TRAF3IP3Q9Y228 551 aa23.66■■□□□ 1.38
SPAST-204ENST00000621856 SOCS7O14512 581 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 PRKCEQ02156 737 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 TBC1D8BQ0IIM8 1120 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 ADAM9Q13443 819 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 VWA3BQ502W6 1294 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 ZC2HC1CQ53FD0 456 aaPredicted RBP23.65■■□□□ 1.38
SPAST-204ENST00000621856 MIIPQ5JXC2 388 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 ZNF720Q7Z2F6 126 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 CEP170P1Q96L14 293 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 DRC1Q96MC2 740 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 FIZ1Q96SL8 496 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 PTPN18Q99952 460 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 SEPT9Q9UHD8 586 aaPredicted RBP23.65■■□□□ 1.38
SPAST-204ENST00000621856 SYNGAP1Q96PV0 1343 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 MCM3APO60318 1980 aa23.65■■□□□ 1.38
SPAST-204ENST00000621856 LOC102724159A0A0B4J2E5 919 aa23.64■■□□□ 1.38
SPAST-204ENST00000621856 FARP2O94887 1054 aaPredicted RBP23.64■■□□□ 1.38
SPAST-204ENST00000621856 NR2F2P24468 414 aa23.64■■□□□ 1.38
SPAST-204ENST00000621856 ZNF157P51786 506 aaPredicted RBP23.64■■□□□ 1.38
SPAST-204ENST00000621856 PWP2Q15269 919 aaKnown RBP23.64■■□□□ 1.38
SPAST-204ENST00000621856 KCNV1Q6PIU1 500 aa23.64■■□□□ 1.38
SPAST-204ENST00000621856 ZC3H3Q8IXZ2 948 aaKnown RBP23.64■■□□□ 1.38
SPAST-204ENST00000621856 ZNF302Q9NR11 478 aa23.64■■□□□ 1.38
SPAST-204ENST00000621856 PCDHB13Q9Y5F0 798 aa23.64■■□□□ 1.38
SPAST-204ENST00000621856 IVNS1ABPQ9Y6Y0 642 aa23.64■■□□□ 1.38
SPAST-204ENST00000621856 IGSF9BQ9UPX0 1349 aa23.64■■□□□ 1.38
SPAST-204ENST00000621856 PLXNA1Q9UIW2 1896 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 ASB14A6NK59 587 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 K7ENM7 598 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 ATG7O95352 703 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 GGPS1O95749 300 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 GYPCP04921 128 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 LY6KQ17RY6 165 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 FAM102BQ5T8I3 360 aa23.64■■□□□ 1.37
SPAST-204ENST00000621856 STBD1O95210 358 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 PLS3P13797 630 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 CASP14P31944 242 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 KCNA1Q09470 495 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 RASAL3Q86YV0 1011 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 CNGA4Q8IV77 575 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 FBXO16Q8IX29 292 aaPredicted RBP23.63■■□□□ 1.37
SPAST-204ENST00000621856 PCMTD1Q96MG8 357 aaPredicted RBP23.63■■□□□ 1.37
SPAST-204ENST00000621856 TMX1Q9H3N1 280 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 NDST4Q9H3R1 872 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 MLXIPQ9HAP2 919 aa23.63■■□□□ 1.37
SPAST-204ENST00000621856 NKRFO15226 690 aaKnown RBP eCLIP23.62■■□□□ 1.37
SPAST-204ENST00000621856 MFAP3LO75121 409 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 MAPTP10636 758 aaKnown RBP23.62■■□□□ 1.37
SPAST-204ENST00000621856 RPL13P26373 211 aaKnown RBP23.62■■□□□ 1.37
SPAST-204ENST00000621856 ADORA2AP29274 412 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 XKR3Q5GH77 459 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms