RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 CC2D1AQ6P1N0 951 aaPredicted RBP6.44□□□□□ -1.38
HDDC2-207ENST00000608532 CXXC5Q7LFL8 322 aaKnown RBP6.44□□□□□ -1.38
HDDC2-207ENST00000608532 DHX37Q8IY37 1157 aaKnown RBP6.44□□□□□ -1.38
HDDC2-207ENST00000608532 CHST13Q8NET6 341 aa6.44□□□□□ -1.38
HDDC2-207ENST00000608532 CALML6Q8TD86 181 aa6.44□□□□□ -1.38
HDDC2-207ENST00000608532 LRRC37BQ96QE4 947 aa6.44□□□□□ -1.38
HDDC2-207ENST00000608532 SMPD4Q9NXE4 827 aa6.44□□□□□ -1.38
HDDC2-207ENST00000608532 GOLGA6L22H0YM25 854 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 CBX4O00257 560 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 DVL2O14641 736 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 CNOT4O95628 575 aaKnown RBP6.43□□□□□ -1.38
HDDC2-207ENST00000608532 EFEMP1Q12805 493 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 NOLC1Q14978 699 aaKnown RBP eCLIP6.43□□□□□ -1.38
HDDC2-207ENST00000608532 CIR1Q86X95 450 aaPredicted RBP6.43□□□□□ -1.38
HDDC2-207ENST00000608532 KIAA1958Q8N8K9 716 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 C8orf49Q96NF6 230 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 ZDHHC5Q9C0B5 715 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 ST6GALNAC2Q9UJ37 374 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 FBXO10Q9UK96 956 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 CNOT11Q9UKZ1 510 aaKnown RBP6.43□□□□□ -1.38
HDDC2-207ENST00000608532 ZKSCAN5Q9Y2L8 839 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 SLC4A7Q9Y6M7 1214 aa6.43□□□□□ -1.38
HDDC2-207ENST00000608532 SLC9A1P19634 815 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 ETV4P43268 484 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 MOGSQ13724 837 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 STILQ15468 1287 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 SLFN13Q68D06 897 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 GRAMD4Q6IC98 578 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 RTKN2Q8IZC4 609 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 NINJ1Q92982 152 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 GNRHR2Q96P88 292 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 LMF1Q96S06 567 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 KIAA1683Q9H0B3 1180 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 ACSS2Q9NR19 701 aa6.42□□□□□ -1.38
HDDC2-207ENST00000608532 INTS7Q9NVH2 962 aaKnown RBP6.42□□□□□ -1.38
HDDC2-207ENST00000608532 A0A0G2JNJ9 132 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 ADRB1P08588 477 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 APEX1P27695 318 aaKnown RBP6.41□□□□□ -1.38
HDDC2-207ENST00000608532 MAGEA10P43363 369 aaPredicted RBP6.41□□□□□ -1.38
HDDC2-207ENST00000608532 MEOX1P50221 254 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 STAT5BP51692 787 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 SLC6A3Q01959 620 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 ZMAT1Q5H9K5 638 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 KANK2Q63ZY3 851 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 LARP4Q71RC2 724 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDDC2-207ENST00000608532 FILIP1Q7Z7B0 1213 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 RTN4RL1Q86UN2 441 aaPredicted RBP6.41□□□□□ -1.38
HDDC2-207ENST00000608532 LRRTM3Q86VH5 581 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 NIM1KQ8IY84 436 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 NXPE1Q8N323 547 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 GIMAP8Q8ND71 665 aaPredicted RBP6.41□□□□□ -1.38
HDDC2-207ENST00000608532 E2F7Q96AV8 911 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 FOXRED1Q96CU9 486 aaPredicted RBP6.41□□□□□ -1.38
HDDC2-207ENST00000608532 SCYL1Q96KG9 808 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 SAMD11Q96NU1 681 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 SSBP3Q9BWW4 388 aaPredicted RBP6.41□□□□□ -1.38
HDDC2-207ENST00000608532 IFT57Q9NWB7 429 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 Q9UFV3 132 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 MAGEL2Q9UJ55 1249 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 FAM184BQ9ULE4 1060 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 NR2E1Q9Y466 385 aa6.41□□□□□ -1.38
HDDC2-207ENST00000608532 GPR42O15529 346 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 GAS7O60861 476 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 PTX3P26022 381 aaPredicted RBP6.4□□□□□ -1.38
HDDC2-207ENST00000608532 FNTBP49356 437 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 RAC3P60763 192 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 ALDH6A1Q02252 535 aaKnown RBP6.4□□□□□ -1.38
HDDC2-207ENST00000608532 ICAM4Q14773 271 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 PCOLCEQ15113 449 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 GPR20Q99678 358 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 FEZ1Q99689 392 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
HDDC2-207ENST00000608532 C12orf65Q9H3J6 166 aaKnown RBP6.4□□□□□ -1.38
HDDC2-207ENST00000608532 H2AFY2Q9P0M6 372 aaPredicted RBP6.4□□□□□ -1.38
HDDC2-207ENST00000608532 UBA6A0AVT1 1052 aaPredicted RBP6.39□□□□□ -1.39
HDDC2-207ENST00000608532 ZNF891A8MT65 544 aaPredicted RBP6.39□□□□□ -1.39
HDDC2-207ENST00000608532 CYP17A1P05093 508 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 RGS3P49796 1198 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 MRE11P49959 708 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 NFKB2Q00653 900 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 ROM1Q03395 351 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 MAP3K12Q12852 859 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 EIF4HQ15056 248 aaKnown RBP6.39□□□□□ -1.39
HDDC2-207ENST00000608532 RNF151Q2KHN1 245 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 PRAMEF9Q5VWM5 478 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
HDDC2-207ENST00000608532 TUBGCP5Q96RT8 1024 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 ELF4Q99607 663 aaPredicted RBP6.39□□□□□ -1.39
HDDC2-207ENST00000608532 FOXB1Q99853 325 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 DEF6Q9H4E7 631 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 SEC61A2Q9H9S3 476 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 OXSMQ9NWU1 459 aa6.39□□□□□ -1.39
HDDC2-207ENST00000608532 THG1LQ9NWX6 298 aaKnown RBP6.39□□□□□ -1.39
HDDC2-207ENST00000608532 APOL3O95236 402 aa6.38□□□□□ -1.39
HDDC2-207ENST00000608532 ATP2A2P16615 1042 aaKnown RBP6.38□□□□□ -1.39
HDDC2-207ENST00000608532 ADAM17P78536 824 aa6.38□□□□□ -1.39
HDDC2-207ENST00000608532 PCBP1Q15365 356 aaKnown RBP eCLIP6.38□□□□□ -1.39
HDDC2-207ENST00000608532 TBR1Q16650 682 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms