RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CHRNA1P02708 482 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 TBC1D8BQ0IIM8 1120 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 MBTPS1Q14703 1052 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 FAM43BQ6ZT52 329 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 BRAPQ7Z569 592 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 USP38Q8NB14 1042 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 ERMNQ8TAM6 284 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 PHOSPHO2Q8TCD6 241 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 APBB2Q92870 758 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 DYDC2Q96IM9 177 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 MAP7D2Q96T17 732 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 EIF2AK1Q9BQI3 630 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 RAB34Q9BZG1 259 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 TRPV2Q9Y5S1 764 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 STK24Q9Y6E0 443 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 CDY2AQ9Y6F7 541 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 SQORQ9Y6N5 450 aa19.37■□□□□ 0.69
SHKBP1-212ENST00000596163 VPS37CA5D8V6 355 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 SOX1O00570 391 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 TECP42680 631 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 TOB1P50616 345 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 CDC42EP1Q00587 391 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 MGAT3Q09327 533 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 TARBP2Q15633 366 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 MTERF2Q49AM1 385 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 PLEKHG4Q58EX7 1191 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 EFCAB12Q6NXP0 572 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 TPH2Q8IWU9 490 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 KIAA0319LQ8IZA0 1049 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 ZBTB10Q96DT7 871 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 SLC9A7Q96T83 725 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 LXNQ9BS40 222 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 CELF4Q9BZC1 486 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 CXXC1Q9P0U4 656 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 PCDHB6Q9Y5E3 794 aa19.36■□□□□ 0.69
SHKBP1-212ENST00000596163 KDM3AQ9Y4C1 1321 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 SLITRK3O94933 977 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 STBD1O95210 358 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 ATP2A2P16615 1042 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 DNM2P50570 870 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 PTGDRQ13258 359 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 ODR4Q5SWX8 454 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 C4orf32Q8N8J7 132 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 DBF4BQ8NFT6 615 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 LRCH3Q96II8 777 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 HSD17B14Q9BPX1 270 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 RGL1Q9NZL6 768 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 KAT6AQ92794 2004 aa19.35■□□□□ 0.69
SHKBP1-212ENST00000596163 LYPLA2O95372 231 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 SYT1P21579 422 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 YWHABP31946 246 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 PRPHP41219 470 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 FXR2P51116 673 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 CYP4A11Q02928 519 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 CTTNQ14247 550 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 PDIA5Q14554 519 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 NBR1Q14596 966 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 RAB30Q15771 203 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 TSHZ1Q6ZSZ6 1077 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 ANO5Q75V66 913 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 CEP170P1Q96L14 293 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 SUGCTQ9HAC7 445 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 TUFT1Q9NNX1 390 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 CYP26B1Q9NR63 512 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 MSRAQ9UJ68 235 aa19.34■□□□□ 0.69
SHKBP1-212ENST00000596163 TRIP12Q14669 1992 aaPredicted RBP19.33■□□□□ 0.69
SHKBP1-212ENST00000596163 MAFO75444 373 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 BMP15O95972 392 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 GHRP10912 638 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 XRCC6P12956 609 aaKnown RBP eCLIP19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 TMEM62Q0P6H9 643 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 HAUS3Q68CZ6 603 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 FAM109BQ6ICB4 259 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 DTHD1Q6ZMT9 781 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 SLC7A3Q8WY07 619 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 CCDC43Q96MW1 224 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 POLR3CQ9BUI4 534 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 ANKEF1Q9NU02 776 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 AKT3Q9Y243 479 aa19.33■□□□□ 0.68
SHKBP1-212ENST00000596163 RANBP2P49792 3224 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 TMEM265A0A087WTH1 108 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 POTEMA6NI47 508 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 AMHP03971 560 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 RFC5P40937 340 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 CLCN3P51790 818 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 CRYBB1P53674 252 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 WDR5P61964 334 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 LPIN1Q14693 890 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 XKR9Q5GH70 373 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 LINC01465Q8N7H1 131 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 LRWD1Q9UFC0 647 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 GINS2Q9Y248 185 aa19.32■□□□□ 0.68
SHKBP1-212ENST00000596163 TANC1Q9C0D5 1861 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 IGKV6-21A0A0C4DH24 114 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 GAS2O43903 313 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms