RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 PDIA5Q14554 519 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 CROCCP2Q86T23 111 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 ZNF410Q86VK4 478 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 AFAP1L2Q8N4X5 818 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 PPP1R2P1Q96PQ5 205 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 WDR70Q9NW82 654 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 SUCLA2Q9P2R7 463 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 UXTQ9UBK9 157 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 E7EVH7 732 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 IKBKBO14920 756 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 SRGAP2CP0DJJ0 459 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 VCAM1P19320 739 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 MCM4P33991 863 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 KIF5AQ12840 1032 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 BFSP1Q12934 665 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 VGLL4Q14135 290 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 PDIA6Q15084 440 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 METTL7BQ6UX53 244 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 DDX42Q86XP3 938 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 PI4K2BQ8TCG2 481 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 UROC1Q96N76 676 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 MOV10L1Q9BXT6 1211 aaKnown RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 PFDN4Q9NQP4 134 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 GABBR1Q9UBS5 961 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 TSKSQ9UJT2 592 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 INPP5FQ9Y2H2 1132 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 A6NJR5 290 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 GSG1L2A8MUP6 293 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 GPR25O00155 361 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 PRRG1O14668 218 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 THPOP40225 353 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 STAT1P42224 750 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 ACVR2BQ13705 512 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 BYSLQ13895 437 aaKnown RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 FSCN1Q16658 493 aaKnown RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 MYSM1Q5VVJ2 828 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 RINT1Q6NUQ1 792 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 TOGARAM2Q6ZUX3 1019 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 MAEAQ7L5Y9 396 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 GPR161Q8N6U8 529 aaKnown RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 ZNF592Q92610 1267 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 TINF2Q9BSI4 451 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 ALDH8A1Q9H2A2 487 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 C11orf49Q9H6J7 331 aa6.84□□□□□ -1.31
SMAD4-212ENST00000591126 TFIP11Q9UBB9 837 aaKnown RBP6.84□□□□□ -1.31
SMAD4-212ENST00000591126 RPTORQ8N122 1335 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF521Q96K83 1311 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 PRKAB2O43741 272 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 APOEP02649 317 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 PDIA3P30101 505 aaKnown RBP6.84□□□□□ -1.32
SMAD4-212ENST00000591126 KPNA1P52294 538 aaPredicted RBP6.84□□□□□ -1.32
SMAD4-212ENST00000591126 ARPP19P56211 112 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 SLC45A4Q5BKX6 768 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 SWSAP1Q6NVH7 229 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 CATSPERGQ6ZRH7 1159 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 ZKSCAN4Q969J2 545 aaPredicted RBP6.84□□□□□ -1.32
SMAD4-212ENST00000591126 MXRA8Q9BRK3 442 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 STAP1Q9ULZ2 295 aa6.84□□□□□ -1.32
SMAD4-212ENST00000591126 PIN4Q9Y237 131 aaKnown RBP6.84□□□□□ -1.32
SMAD4-212ENST00000591126 GAKO14976 1311 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 TBC1D8O95759 1140 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 RPN1P04843 607 aaKnown RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 TUBBP07437 444 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 PEX6Q13608 980 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 TUBB2AQ13885 445 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 ELOA2Q8IYF1 753 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 FIBCD1Q8N539 461 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 ANKLE1Q8NAG6 615 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 TUBB2BQ9BVA1 445 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 UBE2OQ9C0C9 1292 aaKnown RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 SLC9A3R1O14745 358 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 FGBP02675 491 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF165P49910 485 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 EVCP57679 992 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 FBXO18Q8NFZ0 1043 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 RUNDC3BQ96NL0 473 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 IRF2BPLQ9H1B7 796 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 FBXL21Q9UKT6 434 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 Q9Y3F1 56 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 UQCRHLA0A096LP55 91 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 GIPC1O14908 333 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 MMP1P03956 469 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 ZNF18P17022 549 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 FGFR2P21802 821 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 ERCC5P28715 1186 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 ADORA2AP29274 412 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 UBASH3AP57075 661 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 RBP5P82980 135 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 PLCB3Q01970 1234 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 MYL5Q02045 173 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 UBXN1Q04323 297 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 RAPGEF1Q13905 1077 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 EPHA10Q5JZY3 1008 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 LGSNQ5TDP6 509 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 TXNRD3Q86VQ6 643 aa6.83□□□□□ -1.32
SMAD4-212ENST00000591126 SPATA2LQ8IUW3 424 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-212ENST00000591126 GPKOWQ92917 476 aaPredicted RBP eCLIP6.83□□□□□ -1.325e-7■■■□□ 17.4
SMAD4-212ENST00000591126 GSDMAQ96QA5 445 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms