RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 LPAL2Q16609 132 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 ATAT1Q5SQI0 421 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 KIAA1841Q6NSI8 718 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 SYNE3Q6ZMZ3 975 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 CHST3Q7LGC8 479 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 OTOP3Q7RTS5 596 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 SCFD2Q8WU76 684 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 SNX21Q969T3 373 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 TCEANC2Q96MN5 208 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 CYP39A1Q9NYL5 469 aa13.3□□□□□ -0.28
CAPNS1-209ENST00000590049 CCDC69A6NI79 296 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 HSP90AA1P07900 732 aaKnown RBP13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 RASA1P20936 1047 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 AK2P54819 239 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 EXOSC10Q01780 885 aaKnown RBP13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 SERINC5Q86VE9 423 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 BRF1Q92994 677 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 CHMP4CQ96CF2 233 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 ZSCAN31Q96LW9 406 aaPredicted RBP13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 PURBQ96QR8 312 aaKnown RBP13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 ZKSCAN3Q9BRR0 538 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 ALG1Q9BT22 464 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 KATNAL1Q9BW62 490 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 BCO2Q9BYV7 579 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 OSBPL7Q9BZF2 842 aa13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 ADD3Q9UEY8 706 aaKnown RBP13.29□□□□□ -0.28
CAPNS1-209ENST00000590049 LOC102724159A0A0B4J2E5 919 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 FSCN2O14926 492 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 TXNP10599 105 aaKnown RBP13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 PLA2G2AP14555 144 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 PSEN2P49810 448 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 NONOQ15233 471 aaKnown RBP eCLIP13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 PWP2Q15269 919 aaKnown RBP13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 CCDC6Q16204 474 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 COL28A1Q2UY09 1125 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 TKFCQ3LXA3 575 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 IFIT1BQ5T764 474 aaKnown RBP13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 PSAPL1Q6NUJ1 521 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 DHX37Q8IY37 1157 aaKnown RBP13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 NEDD1Q8NHV4 660 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 AFG1LQ8WV93 481 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 TTC14Q96N46 770 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 GPR20Q99678 358 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 ARHGEF3Q9NR81 526 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 ANKRD17O75179 2603 aaKnown RBP13.28□□□□□ -0.28
CAPNS1-209ENST00000590049 SH2B2O14492 632 aaPredicted RBP13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 ARHGAP6O43182 974 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 LIFRP42702 1097 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 ANTXR2P58335 489 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 AASDHQ4L235 1098 aaPredicted RBP13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 PLPP4Q5VZY2 271 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 CELF5Q8N6W0 485 aaKnown RBP13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 FAM126AQ9BYI3 521 aaPredicted RBP13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 FOXQ1Q9C009 403 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 KAT14Q9H8E8 782 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 STX8Q9UNK0 236 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 PCDHB12Q9Y5F1 795 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.29
CAPNS1-209ENST00000590049 CAND2O75155 1236 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 LRRN2O75325 713 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 CTSHP09668 335 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 FDX1P10109 184 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 SRFP11831 508 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 MFSD10Q14728 455 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 RARS2Q5T160 578 aaKnown RBP13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 CATIPQ7Z7H3 387 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 DGKHQ86XP1 1220 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 FBXL16Q8N461 479 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 PLIN4Q96Q06 1357 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 SCNM1Q9BWG6 230 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 LSM14BQ9BX40 385 aaKnown RBP13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 KIAA1671Q9BY89 1806 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 PIEZO2Q9H5I5 2752 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 FEM1BQ9UK73 627 aa13.26□□□□□ -0.29
CAPNS1-209ENST00000590049 KLF18A0A0U1RQI7 1052 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 F5H6K3 240 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 MAP3K13O43283 966 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 FGF18O76093 207 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 TTLL1O95922 423 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 NDUFB10O96000 172 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 KLRC3Q07444 240 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 APOBRQ0VD83 1088 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 DGKDQ16760 1214 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 PAN2Q504Q3 1202 aaKnown RBP13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 DCLRE1AQ6PJP8 1040 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 NSMFQ6X4W1 530 aa13.25□□□□□ -0.29
CAPNS1-209ENST00000590049 GPR152Q8TDT2 470 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms