RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 MYOCDQ8IZQ8 938 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 APBB2Q92870 758 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 C8orf76Q96K31 380 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 FAM20AQ96MK3 541 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 PRDM12Q9H4Q4 367 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 CEP131Q9UPN4 1083 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 TRPV2Q9Y5S1 764 aa16.33■□□□□ 0.2
CACTIN-206ENST00000588749 GJB5O95377 273 aa16.32■□□□□ 0.2
CACTIN-206ENST00000588749 SAFBQ15424 915 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACTIN-206ENST00000588749 TSHZ1Q6ZSZ6 1077 aa16.32■□□□□ 0.2
CACTIN-206ENST00000588749 FAM184AQ8NB25 1140 aa16.32■□□□□ 0.2
CACTIN-206ENST00000588749 TBC1D32Q96NH3 1257 aa16.32■□□□□ 0.2
CACTIN-206ENST00000588749 VAV3Q9UKW4 847 aa16.32■□□□□ 0.2
CACTIN-206ENST00000588749 CHD7Q9P2D1 2997 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 LCHNA4D1U4 455 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 TBX3O15119 743 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 ARHGEF15O94989 841 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 KIAA0319LQ8IZA0 1049 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 NME8Q8N427 588 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 METTL13Q8N6R0 699 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 HAS1Q92839 578 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
CACTIN-206ENST00000588749 AGO3Q9H9G7 860 aaKnown RBP16.31■□□□□ 0.2
CACTIN-206ENST00000588749 NRBP2Q9NSY0 501 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 GINS2Q9Y248 185 aa16.31■□□□□ 0.2
CACTIN-206ENST00000588749 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.3■□□□□ 0.2
CACTIN-206ENST00000588749 EML1O00423 815 aa16.3■□□□□ 0.2
CACTIN-206ENST00000588749 CD52P31358 61 aa16.3■□□□□ 0.2
CACTIN-206ENST00000588749 TAP1Q03518 808 aa16.3■□□□□ 0.2
CACTIN-206ENST00000588749 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
CACTIN-206ENST00000588749 MAFAQ8NHW3 353 aaPredicted RBP16.3■□□□□ 0.2
CACTIN-206ENST00000588749 PPP1R16BQ96T49 567 aa16.3■□□□□ 0.2
CACTIN-206ENST00000588749 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
CACTIN-206ENST00000588749 CERS4Q9HA82 394 aa16.3■□□□□ 0.2
CACTIN-206ENST00000588749 SEPT9Q9UHD8 586 aaPredicted RBP16.3■□□□□ 0.2
CACTIN-206ENST00000588749 KDM3AQ9Y4C1 1321 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 WNT7AO00755 349 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 MAGEB2O15479 319 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 CD2BP2O95400 341 aaKnown RBP16.29■□□□□ 0.2
CACTIN-206ENST00000588749 BAG4O95429 457 aaKnown RBP16.29■□□□□ 0.2
CACTIN-206ENST00000588749 CLCN3P51790 818 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 XKR3Q5GH77 459 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 NCAPH2Q6IBW4 605 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 SLFN12Q8IYM2 578 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 USP38Q8NB14 1042 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 FBXO18Q8NFZ0 1043 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 RAD9AQ99638 391 aa16.29■□□□□ 0.2
CACTIN-206ENST00000588749 TMEM150BA6NC51 233 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 NEMFO60524 1076 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 UPP2O95045 317 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 VTNP04004 478 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 PSMC5P62195 406 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 TBC1D8BQ0IIM8 1120 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 PAK2Q13177 524 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 CALCRLQ16602 461 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 KIZQ2M2Z5 673 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 MTERF2Q49AM1 385 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 EFCAB12Q6NXP0 572 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 SPRED2Q7Z698 418 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 LRRC71Q8N4P6 559 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 TMX3Q96JJ7 454 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 CDHR5Q9HBB8 845 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 PADI3Q9ULW8 664 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 AKT3Q9Y243 479 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 SQORQ9Y6N5 450 aa16.28■□□□□ 0.2
CACTIN-206ENST00000588749 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 STBD1O95210 358 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 IGFBP4P22692 258 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 TMOD1P28289 359 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 QARSP47897 775 aaKnown RBP16.27■□□□□ 0.2
CACTIN-206ENST00000588749 SPIRE1Q08AE8 756 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
CACTIN-206ENST00000588749 TARBP2Q15633 366 aaKnown RBP16.27■□□□□ 0.2
CACTIN-206ENST00000588749 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 LINC01465Q8N7H1 131 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 IL27Q8NEV9 243 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 TMEM40Q8WWA1 233 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 TOP1MTQ969P6 601 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 YME1L1Q96TA2 773 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 OSMRQ99650 979 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 SH2D3AQ9BRG2 576 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 NIFKQ9BYG3 293 aaKnown RBP16.27■□□□□ 0.2
CACTIN-206ENST00000588749 FOXP1Q9H334 677 aaPredicted RBP16.27■□□□□ 0.2
CACTIN-206ENST00000588749 SUGCTQ9HAC7 445 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 INSL6Q9Y581 213 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 TTC3P53804 2025 aa16.27■□□□□ 0.2
CACTIN-206ENST00000588749 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.19
CACTIN-206ENST00000588749 EPOPA6NHQ4 379 aa16.26■□□□□ 0.19
CACTIN-206ENST00000588749 RFXAPO00287 272 aa16.26■□□□□ 0.19
CACTIN-206ENST00000588749 MCM7P33993 719 aa16.26■□□□□ 0.19
CACTIN-206ENST00000588749 MCM2P49736 904 aa16.26■□□□□ 0.19
CACTIN-206ENST00000588749 HTRA4P83105 476 aaPredicted RBP16.26■□□□□ 0.19
CACTIN-206ENST00000588749 NFX1Q12986 1120 aaKnown RBP16.26■□□□□ 0.19
CACTIN-206ENST00000588749 EPHA7Q15375 998 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms