RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 BRMS1Q9HCU9 246 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 DDX25Q9UHL0 483 aaKnown RBP11.17□□□□□ -0.62
SKA2-208ENST00000583927 INSL6Q9Y581 213 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 ATG2AQ2TAZ0 1938 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.16□□□□□ -0.62
SKA2-208ENST00000583927 M0QZ92 97 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 ZNF862O60290 1169 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 C22orf31O95567 290 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 MYOGP15173 224 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 IGBP1P78318 339 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
SKA2-208ENST00000583927 LETM2Q2VYF4 491 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 KIAA0319LQ8IZA0 1049 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 LINC01465Q8N7H1 131 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 MAFAQ8NHW3 353 aaPredicted RBP11.16□□□□□ -0.62
SKA2-208ENST00000583927 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
SKA2-208ENST00000583927 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 TRAPPC12Q8WVT3 735 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 CELF4Q9BZC1 486 aaKnown RBP11.16□□□□□ -0.62
SKA2-208ENST00000583927 OSBPL7Q9BZF2 842 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 UNC45AQ9H3U1 944 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 NRBP2Q9NSY0 501 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 GJB4Q9NTQ9 266 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 SAMM50Q9Y512 469 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 TRPV2Q9Y5S1 764 aa11.16□□□□□ -0.62
SKA2-208ENST00000583927 SLC37A4O43826 429 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 JAK2O60674 1132 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 OATP04181 439 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 GHRP10912 638 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 TRIM29Q14134 588 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 RABEP1Q15276 862 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 TARBP2Q15633 366 aaKnown RBP11.15□□□□□ -0.62
SKA2-208ENST00000583927 ODR4Q5SWX8 454 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 KRT40Q6A162 431 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.15□□□□□ -0.62
SKA2-208ENST00000583927 PIK3AP1Q6ZUJ8 805 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 MIER3Q7Z3K6 550 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 CKAP2LQ8IYA6 745 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 SLFN12Q8IYM2 578 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 SLC17A8Q8NDX2 589 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 ZBED2Q9BTP6 218 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 NIFKQ9BYG3 293 aaKnown RBP11.15□□□□□ -0.62
SKA2-208ENST00000583927 FAM49AQ9H0Q0 323 aaPredicted RBP11.15□□□□□ -0.62
SKA2-208ENST00000583927 PRDM12Q9H4Q4 367 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 LMCD1Q9NZU5 365 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 VAV3Q9UKW4 847 aa11.15□□□□□ -0.62
SKA2-208ENST00000583927 ENPP3O14638 875 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 CCNT1O60563 726 aaKnown RBP11.14□□□□□ -0.63
SKA2-208ENST00000583927 DKC1O60832 514 aaKnown RBP eCLIP11.14□□□□□ -0.63
SKA2-208ENST00000583927 STBD1O95210 358 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 TMOD1P28289 359 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 ERVK-21P61565 698 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 CDC42EP1Q00587 391 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 PRKCEQ02156 737 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 NR5A1Q13285 461 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 ADGRE1Q14246 886 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 XKR3Q5GH77 459 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 EARS2Q5JPH6 523 aaKnown RBP11.14□□□□□ -0.63
SKA2-208ENST00000583927 DIS3L2Q8IYB7 885 aaKnown RBP11.14□□□□□ -0.63
SKA2-208ENST00000583927 MYOCDQ8IZQ8 938 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 HAS1Q92839 578 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 SAMD11Q96NU1 681 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 UIMC1Q96RL1 719 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
SKA2-208ENST00000583927 AGO3Q9H9G7 860 aaKnown RBP11.14□□□□□ -0.63
SKA2-208ENST00000583927 RC3H2Q9HBD1 1191 aaKnown RBP11.14□□□□□ -0.63
SKA2-208ENST00000583927 PADI3Q9ULW8 664 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 PPME1Q9Y570 386 aa11.14□□□□□ -0.63
SKA2-208ENST00000583927 MYO7AQ13402 2215 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 IGKV6-21A0A0C4DH24 114 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 LCHNA4D1U4 455 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 LINC01553A4QN01 128 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 BTBD18B2RXH4 712 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 CHMP2AO43633 222 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 GPR32O75388 356 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 ARHGEF15O94989 841 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 BAG4O95429 457 aaKnown RBP11.13□□□□□ -0.63
SKA2-208ENST00000583927 P4HBP07237 508 aaKnown RBP11.13□□□□□ -0.63
SKA2-208ENST00000583927 CRYBB1P53674 252 aaPredicted RBP11.13□□□□□ -0.63
SKA2-208ENST00000583927 PSMC5P62195 406 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 SPIRE1Q08AE8 756 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 ORC2Q13416 577 aaPredicted RBP11.13□□□□□ -0.63
SKA2-208ENST00000583927 UGCGQ16739 394 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 CCDC83Q8IWF9 413 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 GJA10Q969M2 543 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 ZBTB10Q96DT7 871 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 TGS1Q96RS0 853 aaKnown RBP11.13□□□□□ -0.63
SKA2-208ENST00000583927 FOXP1Q9H334 677 aaPredicted RBP11.13□□□□□ -0.63
SKA2-208ENST00000583927 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
SKA2-208ENST00000583927 TTC28Q96AY4 2481 aa11.13□□□□□ -0.63
SKA2-208ENST00000583927 ST18O60284 1047 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 CD52P31358 61 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 QARSP47897 775 aaKnown RBP11.12□□□□□ -0.63
SKA2-208ENST00000583927 TBC1D8BQ0IIM8 1120 aa11.12□□□□□ -0.63
SKA2-208ENST00000583927 PAK2Q13177 524 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms