RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 TEX33O43247 280 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 ATP6V1G2O95670 118 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 GNRH1P01148 92 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 HOXD10P28358 340 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 SCTRP47872 440 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 PRMT2P55345 433 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 EIF3BP55884 814 aaKnown RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 MRPS5P82675 430 aaKnown RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 ZBED6P86452 979 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 CAVIN4Q5BKX8 364 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 TTMPQ5BVD1 217 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 CMPK2Q5EBM0 449 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 METTL24Q5JXM2 366 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 DCAF15Q66K64 600 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 CDCA2Q69YH5 1023 aaPredicted RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 SLC30A9Q6PML9 568 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 C17orf99Q6UX52 265 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 FOXP4Q8IVH2 680 aaPredicted RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 TTC13Q8NBP0 860 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 SPATA4Q8NEY3 305 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 MIPOL1Q8TD10 442 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 LMBR1Q8WVP7 490 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 RIN2Q8WYP3 895 aaPredicted RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 TATDN2Q93075 761 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 SUCLG2Q96I99 432 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 ZIM3Q96PE6 472 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 DEFB118Q96PH6 123 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 ZNF341Q9BYN7 854 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 STMN4Q9H169 189 aaPredicted RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 NOD2Q9HC29 1040 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 GDF3Q9NR23 364 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 THEGQ9P2T0 379 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 FBXO2Q9UK22 296 aaPredicted RBP8.18□□□□□ -1.1
TVP23C-208ENST00000581273 TAF6LQ9Y6J9 622 aa8.18□□□□□ -1.1
TVP23C-208ENST00000581273 LGALS16A8MUM7 142 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 KCNJ18B7U540 433 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 KIF28PB7ZC32 967 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 STXBP3O00186 592 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 CES2O00748 559 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 SH2B2O14492 632 aaPredicted RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 ZNF213O14771 459 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 TRAPPC3O43617 180 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 ACTN4O43707 911 aaKnown RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 DTNBO60941 627 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 WFS1O76024 890 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 VIMP08670 466 aaKnown RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 MYBL2P10244 700 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 BMP6P22004 513 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 HSPA9P38646 679 aaKnown RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 GCLCP48506 637 aaPredicted RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 ZNF131P52739 623 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 FOXK2Q01167 660 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 ROR2Q01974 943 aaKnown RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 UBXN1Q04323 297 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 PRKCZQ05513 592 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 PPATQ06203 517 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 PDE4DQ08499 809 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 ITGB3BPQ13352 177 aaPredicted RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 KCNJ12Q14500 433 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 KRT31Q15323 416 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 TMEM132AQ24JP5 1023 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 LRRC24Q50LG9 513 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 TCP11X2Q5H9J9 407 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 APBB1IPQ7Z5R6 666 aaPredicted RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 FBXO33Q7Z6M2 555 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 CPLX4Q7Z7G2 160 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 HOOK3Q86VS8 718 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 MB21D2Q8IYB1 491 aaPredicted RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 TRMT44Q8IYL2 757 aaKnown RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 TMTC2Q8N394 836 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 MICAL1Q8TDZ2 1067 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 HVCN1Q96D96 273 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 SEC16BQ96JE7 1060 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 CAPZA3Q96KX2 299 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 CCDC43Q96MW1 224 aaKnown RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 SEC62Q99442 399 aaKnown RBP8.17□□□□□ -1.1
TVP23C-208ENST00000581273 TMBIM4Q9HC24 238 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 MROH5Q6ZUA9 1318 aa8.17□□□□□ -1.1
TVP23C-208ENST00000581273 BICDL2A1A5D9 508 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 LRRD1A4D1F6 860 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 CCT8L1PA6NM43 557 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 PDLIM1O00151 329 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 ASAP2O43150 1006 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 ZBTB43O43298 467 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 ORC4O43929 436 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 FGFR1OPO95684 399 aaKnown RBP8.16□□□□□ -1.1
TVP23C-208ENST00000581273 CYP2C8P10632 490 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 ELNP15502 786 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 CNGA1P29973 690 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 CDC27P30260 824 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 GBP1P32455 592 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 ATP1A2P50993 1020 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 RPS6KA3P51812 740 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 CCNHP51946 323 aaPredicted RBP8.16□□□□□ -1.1
TVP23C-208ENST00000581273 CCNG1P51959 295 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 FCGRTP55899 365 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 PPP2R2AP63151 447 aa8.16□□□□□ -1.1
TVP23C-208ENST00000581273 ELF3P78545 371 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms