RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 ERMNQ8TAM6 284 aa17.25■□□□□ 0.35
IFT20-206ENST00000578122 NIFKQ9BYG3 293 aaKnown RBP17.25■□□□□ 0.35
IFT20-206ENST00000578122 FTOQ9C0B1 505 aaKnown RBP eCLIP17.25■□□□□ 0.35
IFT20-206ENST00000578122 ZSWIM4Q9H7M6 989 aa17.25■□□□□ 0.35
IFT20-206ENST00000578122 WRAP73Q9P2S5 460 aaPredicted RBP17.25■□□□□ 0.35
IFT20-206ENST00000578122 LRWD1Q9UFC0 647 aa17.25■□□□□ 0.35
IFT20-206ENST00000578122 SEPT9Q9UHD8 586 aaPredicted RBP17.25■□□□□ 0.35
IFT20-206ENST00000578122 PCDHA2Q9Y5H9 948 aa17.25■□□□□ 0.35
IFT20-206ENST00000578122 CLIC4Q9Y696 253 aa17.25■□□□□ 0.35
IFT20-206ENST00000578122 SCN5AQ14524 2016 aa17.25■□□□□ 0.35
IFT20-206ENST00000578122 CKBP12277 381 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 KLRC1P26715 233 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 ANP32AP39687 249 aaKnown RBP17.24■□□□□ 0.35
IFT20-206ENST00000578122 THPOP40225 353 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 CCL23P55773 120 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 TAF2Q6P1X5 1199 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 MAMSTRQ6ZN01 415 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 TMEM199Q8N511 208 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 IGSF22Q8N9C0 903 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 ZBTB10Q96DT7 871 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
IFT20-206ENST00000578122 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 TANC1Q9C0D5 1861 aa17.24■□□□□ 0.35
IFT20-206ENST00000578122 MKI67P46013 3256 aaKnown RBP17.23■□□□□ 0.35
IFT20-206ENST00000578122 TMEM150BA6NC51 233 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 MAGEB2O15479 319 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 LYPLA2O95372 231 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 SPATA31C1P0DKV0 1188 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 SELPP16109 830 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
IFT20-206ENST00000578122 FPGSQ05932 587 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 GSE1Q14687 1217 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 PTPAQ15257 358 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 TARBP2Q15633 366 aaKnown RBP17.23■□□□□ 0.35
IFT20-206ENST00000578122 MTERF2Q49AM1 385 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 ANO5Q75V66 913 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 GDF15Q99988 308 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 POLR3CQ9BUI4 534 aaPredicted RBP17.23■□□□□ 0.35
IFT20-206ENST00000578122 TUFT1Q9NNX1 390 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 STK24Q9Y6E0 443 aa17.23■□□□□ 0.35
IFT20-206ENST00000578122 ARID2Q68CP9 1835 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 VWA3AA6NCI4 1184 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 CAND2O75155 1236 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 MED24O75448 989 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 C22orf31O95567 290 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 BRD1O95696 1058 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 IQCF3P0C7M6 154 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 CSF2RAP15509 400 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 RPA1P27694 616 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 YWHABP31946 246 aaKnown RBP17.22■□□□□ 0.35
IFT20-206ENST00000578122 CCT6AP40227 531 aaKnown RBP17.22■□□□□ 0.35
IFT20-206ENST00000578122 PPIGQ13427 754 aaKnown RBP eCLIP17.22■□□□□ 0.35
IFT20-206ENST00000578122 ZNF618Q5T7W0 954 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 PLA2G4FQ68DD2 849 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 LRRC8DQ7L1W4 858 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 OTUD6AQ7L8S5 288 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 RSPH3Q86UC2 560 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 CATSPER3Q86XQ3 398 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 DNAJB3Q8WWF6 145 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 SCLYQ96I15 445 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 FAM49AQ9H0Q0 323 aaPredicted RBP17.22■□□□□ 0.35
IFT20-206ENST00000578122 ZDHHC9Q9Y397 364 aa17.22■□□□□ 0.35
IFT20-206ENST00000578122 SMIM35A0A1B0GVV1 85 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 PP2D1A8MPX8 630 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 ZBTB39O15060 712 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 RPLP2P05387 115 aaKnown RBP17.21■□□□□ 0.35
IFT20-206ENST00000578122 NPEPPSP55786 919 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
IFT20-206ENST00000578122 KRT79Q5XKE5 535 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
IFT20-206ENST00000578122 RPAINQ86UA6 219 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 METTL13Q8N6R0 699 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 SNX29Q8TEQ0 813 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 SH2D3AQ9BRG2 576 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 UBE2OQ9C0C9 1292 aaKnown RBP17.21■□□□□ 0.35
IFT20-206ENST00000578122 CYP26B1Q9NR63 512 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 ANKEF1Q9NU02 776 aa17.21■□□□□ 0.35
IFT20-206ENST00000578122 TFIP11Q9UBB9 837 aaKnown RBP17.21■□□□□ 0.35
IFT20-206ENST00000578122 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
IFT20-206ENST00000578122 TNRC18O15417 2968 aaPredicted RBP17.21■□□□□ 0.35
IFT20-206ENST00000578122 LOXHD1Q8IVV2 1947 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 RSPH10B2B2RC85 870 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 CTSHP09668 335 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 RSPH10BP0C881 870 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.34
IFT20-206ENST00000578122 MUTP22033 750 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 MARCKSP29966 332 aaPredicted RBP17.2■□□□□ 0.34
IFT20-206ENST00000578122 CDC25AP30304 524 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 BMP8BP34820 402 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 RFC2P35250 354 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
IFT20-206ENST00000578122 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 STK38Q15208 465 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 XKR9Q5GH70 373 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 EFCAB12Q6NXP0 572 aa17.2■□□□□ 0.34
IFT20-206ENST00000578122 TRAF7Q6Q0C0 670 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms