RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 XYLT2Q9H1B5 865 aa6.72□□□□□ -1.33
USP8-218ENST00000561330 BARX1Q9HBU1 254 aaPredicted RBP6.72□□□□□ -1.33
USP8-218ENST00000561330 OTOL1A6NHN0 477 aaPredicted RBP6.71□□□□□ -1.34
USP8-218ENST00000561330 LSSP48449 732 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 ALDH6A1Q02252 535 aaKnown RBP6.71□□□□□ -1.34
USP8-218ENST00000561330 EPHA7Q15375 998 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 DHCR24Q15392 516 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 STILQ15468 1287 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 BORAQ6PGQ7 559 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 C11orf74Q86VG3 221 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 ZZZ3Q8IYH5 903 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 KLHL36Q8N4N3 616 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 UBR7Q8N806 425 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 USP7Q93009 1102 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 SCYL1Q96KG9 808 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 FOXB1Q99853 325 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 OR10A5Q9H207 317 aa6.71□□□□□ -1.34
USP8-218ENST00000561330 FKBP9O95302 570 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 SLC6A3Q01959 620 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 ROM1Q03395 351 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 ADCY1Q08828 1119 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 NFATC3Q12968 1075 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 TTC38Q5R3I4 469 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 ESRP1Q6NXG1 681 aaKnown RBP6.7□□□□□ -1.34
USP8-218ENST00000561330 Q6ZUG5 572 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 TTLL10Q6ZVT0 673 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 FKBP9P1Q75LS8 142 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 FRMD5Q7Z6J6 570 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 FBXO10Q9UK96 956 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 ZDHHC9Q9Y397 364 aa6.7□□□□□ -1.34
USP8-218ENST00000561330 UBA6A0AVT1 1052 aaPredicted RBP6.69□□□□□ -1.34
USP8-218ENST00000561330 CUTAO60888 179 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 HOXA5P20719 270 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 APEX1P27695 318 aaKnown RBP6.69□□□□□ -1.34
USP8-218ENST00000561330 POLD1P28340 1107 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 ADCYAP1R1P41586 468 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 CD83Q01151 205 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 MAML3Q96JK9 1138 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 SPTLC3Q9NUV7 552 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 ADAM29Q9UKF5 820 aa6.69□□□□□ -1.34
USP8-218ENST00000561330 VIL1P09327 827 aaKnown RBP6.68□□□□□ -1.34
USP8-218ENST00000561330 CD40P25942 277 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 CNGA1P29973 690 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 ADCY8P40145 1251 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 SMAD3P84022 425 aaKnown RBP6.68□□□□□ -1.34
USP8-218ENST00000561330 STRN3Q13033 797 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 KANK2Q63ZY3 851 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 SLFN12LQ6IEE8 588 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 KRT26Q7Z3Y9 468 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 REXO1L1PQ8IX06 675 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 IFNL2Q8IZJ0 200 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 LGI4Q8N135 537 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 MBD6Q96DN6 1003 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 AJUBAQ96IF1 538 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 TUBGCP5Q96RT8 1024 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 TTC1Q99614 292 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 KATNBL1Q9H079 304 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 IFT22Q9H7X7 185 aa6.68□□□□□ -1.34
USP8-218ENST00000561330 TGM5O43548 720 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 ZEB2O60315 1214 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 PRLP01236 227 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 BPIP17213 487 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 LSP1P33241 339 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 CNR2P34972 360 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 MAP3K12Q12852 859 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 TOP3AQ13472 1001 aaPredicted RBP6.67□□□□□ -1.34
USP8-218ENST00000561330 MOGSQ13724 837 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 LRRC32Q14392 662 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 ATP13A4Q4VNC1 1196 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 RNF187Q5TA31 235 aaPredicted RBP6.67□□□□□ -1.34
USP8-218ENST00000561330 PRAMEF9Q5VWM5 478 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 GRAMD4Q6IC98 578 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 TIGD7Q6NT04 549 aaPredicted RBP6.67□□□□□ -1.34
USP8-218ENST00000561330 STRA8Q7Z7C7 330 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 KBTBD2Q8IY47 623 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 C7orf31Q8N865 590 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 RTF1Q92541 710 aaKnown RBP6.67□□□□□ -1.34
USP8-218ENST00000561330 CARD11Q9BXL7 1154 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 ADAM7Q9H2U9 754 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 ZMAT4Q9H898 229 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 SPC25Q9HBM1 224 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 RAPGEFL1Q9UHV5 662 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.67□□□□□ -1.34
USP8-218ENST00000561330 SBNO2Q9Y2G9 1366 aa6.67□□□□□ -1.34
USP8-218ENST00000561330 CPEP16870 476 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 CSF2RBP32927 897 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 RGS3P49796 1198 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 KCNQ1P51787 676 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 UBXN11Q5T124 520 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 GPR158Q5T848 1215 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 PLEKHH3Q7Z736 793 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 PHYKPLQ8IUZ5 450 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 TEPSINQ96N21 525 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 ZDHHC5Q9C0B5 715 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 EMC7Q9NPA0 242 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 CDC42EP3Q9UKI2 254 aa6.66□□□□□ -1.34
USP8-218ENST00000561330 A0A0G2JLL6 359 aaPredicted RBP6.65□□□□□ -1.34
USP8-218ENST00000561330 A0A0G2JNJ9 132 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 337.1 ms