RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TARBP2Q15633 366 aaKnown RBP5.88□□□□□ -1.47
CASC4-206ENST00000558847 NFE2Q16621 373 aaPredicted RBP5.88□□□□□ -1.47
CASC4-206ENST00000558847 KCTD1Q719H9 257 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 FRMD5Q7Z6J6 570 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.88□□□□□ -1.47
CASC4-206ENST00000558847 B3GNT8Q7Z7M8 397 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 RASSF3Q86WH2 238 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 NOSTRINQ8IVI9 506 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 ZNF610Q8N9Z0 462 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 SMAD5Q99717 465 aaKnown RBP5.88□□□□□ -1.47
CASC4-206ENST00000558847 USP40Q9NVE5 1235 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 MYOTQ9UBF9 498 aa5.88□□□□□ -1.47
CASC4-206ENST00000558847 TCRBV5S2A0A599 114 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 PLA2G1BP04054 148 aaKnown RBP5.87□□□□□ -1.47
CASC4-206ENST00000558847 NCAM1P13591 858 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 CACNB2Q08289 660 aaPredicted RBP5.87□□□□□ -1.47
CASC4-206ENST00000558847 KLF1Q13351 362 aaPredicted RBP5.87□□□□□ -1.47
CASC4-206ENST00000558847 PIN1Q13526 163 aaPredicted RBP5.87□□□□□ -1.47
CASC4-206ENST00000558847 TERF2Q15554 542 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 BROXQ5VW32 411 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 CREB3L3Q68CJ9 461 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 FRMD7Q6ZUT3 714 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 FAM126BQ8IXS8 530 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 TP53I13Q8NBR0 393 aaPredicted RBP5.87□□□□□ -1.47
CASC4-206ENST00000558847 TTLL11Q8NHH1 800 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 COG1Q8WTW3 980 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 DLG3Q92796 817 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 E2F7Q96AV8 911 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 C8orf48Q96LL4 319 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 YIPF4Q9BSR8 244 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 SLC13A1Q9BZW2 595 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 AASDHPPTQ9NRN7 309 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 TOMM22Q9NS69 142 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 KCNG1Q9UIX4 513 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 NOC2LQ9Y3T9 749 aaKnown RBP5.87□□□□□ -1.47
CASC4-206ENST00000558847 MRFAP1Q9Y605 127 aa5.87□□□□□ -1.47
CASC4-206ENST00000558847 TCRBV5S4A2TA0A5A2 114 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 SCDO00767 359 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 GABRDO14764 452 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 FFAR3O14843 346 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 CCND1P24385 295 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 SDHAP31040 664 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 SLURP1P55000 103 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 HERVK_113P62684 666 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 HTRA3P83110 453 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 SMAD3P84022 425 aaKnown RBP5.86□□□□□ -1.47
CASC4-206ENST00000558847 EPHA7Q15375 998 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 SMAD2Q15796 467 aaKnown RBP5.86□□□□□ -1.47
CASC4-206ENST00000558847 ETV3LQ6ZN32 361 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 MILR1Q7Z6M3 343 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 GGNQ86UU5 652 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 AMOTL1Q8IY63 956 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 ARRDC4Q8NCT1 418 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 ACAP3Q96P50 834 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 ELF4Q99607 663 aaPredicted RBP5.86□□□□□ -1.47
CASC4-206ENST00000558847 ASH2LQ9UBL3 628 aa5.86□□□□□ -1.47
CASC4-206ENST00000558847 KIF3BO15066 747 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 TGM5O43548 720 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 TSPAN6O43657 245 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 PTPN1P18031 435 aaKnown RBP5.85□□□□□ -1.47
CASC4-206ENST00000558847 VCAM1P19320 739 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 SLC9A1P19634 815 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 ERVK-21P61565 698 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 FOXO4P98177 505 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 TUSC3Q13454 348 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 RTP5Q14D33 572 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 SPATS1Q496A3 300 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 UBXN11Q5T124 520 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 BTBD8Q5XKL5 378 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 CHPFQ8IZ52 775 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 ADGRG2Q8IZP9 1017 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 FAM26EQ8N5C1 309 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 SMARCC2Q8TAQ2 1214 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 SH3RF2Q8TEC5 729 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 SSH1Q8WYL5 1049 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 TRIM8Q9BZR9 551 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 CD244Q9BZW8 370 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 ZDHHC5Q9C0B5 715 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 CCDC8Q9H0W5 538 aaPredicted RBP5.85□□□□□ -1.47
CASC4-206ENST00000558847 NGRNQ9NPE2 291 aaKnown RBP5.85□□□□□ -1.47
CASC4-206ENST00000558847 RIC8BQ9NVN3 520 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 H2AFY2Q9P0M6 372 aaPredicted RBP5.85□□□□□ -1.47
CASC4-206ENST00000558847 TELO2Q9Y4R8 837 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 PMF1-BGLAPU3KQ54 211 aa5.85□□□□□ -1.47
CASC4-206ENST00000558847 A0A1B0GTL3 188 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 GOLGA6CA6NDK9 693 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 GOLGA6BA6NDN3 693 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 SLC27A2O14975 620 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 FOXP2O15409 715 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 AKAP10O43572 662 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 SNUPNO95149 360 aaKnown RBP5.84□□□□□ -1.47
CASC4-206ENST00000558847 GOLGA6DP0CG33 693 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 MYBL2P10244 700 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 STAT5AP42229 794 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 DLX2Q07687 328 aaPredicted RBP5.84□□□□□ -1.47
CASC4-206ENST00000558847 HLTFQ14527 1009 aaKnown RBP eCLIP5.84□□□□□ -1.47
CASC4-206ENST00000558847 TMEM132BQ14DG7 1078 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 PTPN21Q16825 1174 aa5.84□□□□□ -1.47
CASC4-206ENST00000558847 CR1LQ2VPA4 569 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms