RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
PFDN5-212ENST00000550880 TYW1Q9NV66 732 aaKnown RBP12.66□□□□□ -0.38
PFDN5-212ENST00000550880 PCDHA6Q9UN73 950 aa12.66□□□□□ -0.38
PFDN5-212ENST00000550880 PCDHA8Q9Y5H6 950 aa12.66□□□□□ -0.38
PFDN5-212ENST00000550880 NFASCO94856 1347 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 CCDC69A6NI79 296 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 FSCN2O14926 492 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 HOXA2O43364 376 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
PFDN5-212ENST00000550880 CALM1P0DP23 149 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 CALM2P0DP24 149 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 CALM3P0DP25 149 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 KLRC1P26715 233 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 RBM10P98175 930 aaKnown RBP12.65□□□□□ -0.38
PFDN5-212ENST00000550880 FAM102BQ5T8I3 360 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 PLPP4Q5VZY2 271 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 FAM160B1Q5W0V3 765 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 LLGL2Q6P1M3 1020 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 KREMEN2Q8NCW0 462 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 VN1R2Q8NFZ6 395 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 RASGRP4Q8TDF6 673 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 IGDCC4Q8TDY8 1250 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 TRAPPC12Q8WVT3 735 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 MRPS27Q92552 414 aaKnown RBP12.65□□□□□ -0.38
PFDN5-212ENST00000550880 CASP10Q92851 521 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 PCYT2Q99447 389 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 MXRA8Q9BRK3 442 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 S1PR5Q9H228 398 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 ERVK-5Q9HDB9 667 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 KCNH7Q9NS40 1196 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 ST3GAL5Q9UNP4 418 aa12.65□□□□□ -0.38
PFDN5-212ENST00000550880 ZDBF2Q9HCK1 2354 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 USP34Q70CQ2 3546 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 PROB1E7EW31 1015 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 BACH1O14867 736 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 HBP1O60381 514 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 SP100P23497 879 aaPredicted RBP12.64□□□□□ -0.39
PFDN5-212ENST00000550880 PPM1AP35813 382 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 PLCB3Q01970 1234 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 UBE2SQ16763 222 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 ABI1Q8IZP0 508 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 MTA3Q9BTC8 594 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 ELAC1Q9H777 363 aaKnown RBP12.64□□□□□ -0.39
PFDN5-212ENST00000550880 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 SORCS3Q9UPU3 1222 aa12.64□□□□□ -0.39
PFDN5-212ENST00000550880 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
PFDN5-212ENST00000550880 C9IYK1 514 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 MGEA5O60502 916 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
PFDN5-212ENST00000550880 ITIH3Q06033 890 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 ZNF484Q5JVG2 852 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 SYCE2Q6PIF2 218 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 HEATR3Q7Z4Q2 680 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 SRBD1Q8N5C6 995 aaKnown RBP12.63□□□□□ -0.39
PFDN5-212ENST00000550880 TMEM87AQ8NBN3 555 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 ZNF558Q96NG5 402 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 TMEM117Q9H0C3 514 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 IL25Q9H293 177 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 MFSD1Q9H3U5 465 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 LY9Q9HBG7 655 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 COL1A2P08123 1366 aa12.63□□□□□ -0.39
PFDN5-212ENST00000550880 PLEKHA8P1O95397 391 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 FOSP01100 380 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-212ENST00000550880 PDGFBP01127 241 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-212ENST00000550880 IGHDP01880 384 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 FGFR1P11362 822 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 ZSCAN20P17040 1043 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-212ENST00000550880 PDE4AP27815 886 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 ZNF76P36508 570 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 MTHFRP42898 656 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 ANTXR2P58335 489 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 PTH1RQ03431 593 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 KCNC3Q14003 757 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
PFDN5-212ENST00000550880 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 MIS18BP1Q6P0N0 1132 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 PDXDC2PQ6P474 469 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 KCNT2Q6UVM3 1135 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 CKAP2LQ8IYA6 745 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-212ENST00000550880 KIAA0319LQ8IZA0 1049 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 CMTR1Q8N1G2 835 aaKnown RBP12.62□□□□□ -0.39
PFDN5-212ENST00000550880 LRRC43Q8N309 656 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 ADAM7Q9H2U9 754 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 CWH43Q9H720 699 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 SPG21Q9NZD8 308 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 SLC12A7Q9Y666 1083 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 KIAA1671Q9BY89 1806 aa12.62□□□□□ -0.39
PFDN5-212ENST00000550880 ZFHX2Q9C0A1 2572 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-212ENST00000550880 KMT2EQ8IZD2 1858 aa12.61□□□□□ -0.39
PFDN5-212ENST00000550880 HIDE1A8MVS5 230 aa12.61□□□□□ -0.39
PFDN5-212ENST00000550880 PRC1O43663 620 aa12.61□□□□□ -0.39
PFDN5-212ENST00000550880 ATG7O95352 703 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms