RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 PHF20L1A8MW92 1017 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 IPO5O00410 1097 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 NCK2O43639 380 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 ICAM1P05362 532 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 EPB41P11171 864 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 UCHL3P15374 230 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 SETQ01105 290 aaPredicted RBP20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 C2orf54Q08AI8 447 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 EPHA7Q15375 998 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 EXOC3L4Q17RC7 722 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 KSR1Q8IVT5 923 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 RNF10Q8N5U6 811 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 SLC35C1Q96A29 364 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 NOX5Q96PH1 765 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 NACC1Q96RE7 527 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 MXRA8Q9BRK3 442 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 METTL14Q9HCE5 456 aaKnown RBP20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 ADAMTS1Q9UHI8 967 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 PCDHB13Q9Y5F0 798 aa20.33■□□□□ 0.85
PRPF40B-208ENST00000548436 H3BQF6 201 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 ITGB5P18084 799 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 MUTP22033 750 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 TCERG1LQ5VWI1 586 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 IRF2BP2Q7Z5L9 587 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 TXLNBQ8N3L3 684 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 BORCS6Q96GS4 357 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 TEKT3Q9BXF9 490 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 MYOZ2Q9NPC6 264 aa20.33■□□□□ 0.84
PRPF40B-208ENST00000548436 NFIBO00712 420 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 CXCR5P32302 372 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 ZNF131P52739 623 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 BANK1Q8NDB2 785 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 PSMB7Q99436 277 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 LXNQ9BS40 222 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 TLR10Q9BXR5 811 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 HYOU1Q9Y4L1 999 aa20.32■□□□□ 0.84
PRPF40B-208ENST00000548436 TARSL2A2RTX5 802 aaKnown RBP20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 DGKZQ13574 1117 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 RASA3Q14644 834 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 COG2Q14746 738 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 CASP8Q14790 479 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 ZNF720Q7Z2F6 126 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 ZNF572Q7Z3I7 529 aaPredicted RBP20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 IL31RAQ8NI17 732 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 CLEC4DQ8WXI8 215 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 PACSIN1Q9BY11 444 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 PDE11AQ9HCR9 933 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 SIX2Q9NPC8 291 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 DDX39AO00148 427 aaKnown RBP20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 KLRC1P26715 233 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 PTK2Q05397 1052 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 NAB2Q15742 525 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 RBM46Q8TBY0 533 aaKnown RBP20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 ZBTB9Q96C00 473 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 HOOK2Q96ED9 719 aa20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 AJAP1Q9UKB5 411 aaPredicted RBP20.31■□□□□ 0.84
PRPF40B-208ENST00000548436 RPTORQ8N122 1335 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 ZMYND10O75800 440 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 TCP1P17987 556 aaKnown RBP20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 NAP1L1P55209 391 aaKnown RBP20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 GBP6Q6ZN66 633 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 MSL3Q8N5Y2 521 aaKnown RBP20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 RIT2Q99578 217 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 SMARCAL1Q9NZC9 954 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 PKD2L1Q9P0L9 805 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 SEL1LQ9UBV2 794 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 ZHX1Q9UKY1 873 aaPredicted RBP20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 EGFRP00533 1210 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 NFIL3Q16649 462 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 CIAPIN1Q6FI81 312 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 IQCEQ6IPM2 695 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 ZNF571Q7Z3V5 609 aaPredicted RBP20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 FAM178BQ8IXR5 827 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 PRPF38AQ8NAV1 312 aaKnown RBP20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 TEPSINQ96N21 525 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 LUC7LQ9NQ29 371 aaKnown RBP20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 KCNH7Q9NS40 1196 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 EHD2Q9NZN4 543 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 KCND2Q9NZV8 630 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 ODF2LQ9ULJ1 636 aa20.3■□□□□ 0.84
PRPF40B-208ENST00000548436 LRRIQ3A6PVS8 624 aaPredicted RBP20.29■□□□□ 0.84
PRPF40B-208ENST00000548436 FAM193AP78312 1265 aa20.29■□□□□ 0.84
PRPF40B-208ENST00000548436 KIAA0753Q2KHM9 967 aa20.29■□□□□ 0.84
PRPF40B-208ENST00000548436 FAM186BQ8IYM0 893 aa20.29■□□□□ 0.84
PRPF40B-208ENST00000548436 MMGT1Q8N4V1 131 aa20.29■□□□□ 0.84
PRPF40B-208ENST00000548436 SPATA4Q8NEY3 305 aa20.29■□□□□ 0.84
PRPF40B-208ENST00000548436 GCNT4Q9P109 453 aa20.29■□□□□ 0.84
PRPF40B-208ENST00000548436 WDR46O15213 610 aaKnown RBP20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 PALMO75781 387 aa20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 MCM3P25205 808 aa20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 PSMC2P35998 433 aaKnown RBP20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 ITIH3Q06033 890 aa20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 ODR4Q5SWX8 454 aa20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 GJB7Q6PEY0 223 aa20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 CPXCR1Q8N123 301 aa20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 DHX15O43143 795 aaKnown RBP20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 BCRP11274 1271 aa20.28■□□□□ 0.84
PRPF40B-208ENST00000548436 GUCY2CP25092 1073 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms