RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 KRBA1A5PL33 1030 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 C2orf71A6NGG8 1288 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 POTEMA6NI47 508 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 NT5C1B-RDH14C9J2C7 533 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 KLRF2D3W0D1 207 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 HOXB8P17481 243 aaPredicted RBP6.03□□□□□ -1.44
CHD4-205ENST00000536301 MX1P20591 662 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 PDE4AP27815 886 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 PLCB3Q01970 1234 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 SEC23AQ15436 765 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 GNPTABQ3T906 1256 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 MCMDC2Q4G0Z9 681 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 USP17L6PQ6QN14 398 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 POTEGQ6S5H5 508 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 CYB5R4Q7L1T6 521 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 RSPH3Q86UC2 560 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 ZDHHC14Q8IZN3 488 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 SIX5Q8N196 739 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 TDRD5Q8NAT2 981 aaKnown RBP6.03□□□□□ -1.44
CHD4-205ENST00000536301 ST13P5Q8NFI4 369 aaPredicted RBP6.03□□□□□ -1.44
CHD4-205ENST00000536301 RSAD2Q8WXG1 361 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 ESR2Q92731 530 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 CASP10Q92851 521 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 ZSCAN10Q96SZ4 725 aaPredicted RBP6.03□□□□□ -1.44
CHD4-205ENST00000536301 ADAM2Q99965 735 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 FTHL17Q9BXU8 183 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 CELF4Q9BZC1 486 aaKnown RBP6.03□□□□□ -1.44
CHD4-205ENST00000536301 GINS2Q9Y248 185 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 PCDHB7Q9Y5E2 793 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 PCDHB15Q9Y5E8 787 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 WDR81Q562E7 1941 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 MIA3Q5JRA6 1907 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 PALM3A6NDB9 673 aaPredicted RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 N4BP1O75113 896 aaKnown RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 LRRN2O75325 713 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 EOMESO95936 686 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 DCNP07585 359 aaKnown RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 MS4A1P11836 297 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 GLULP15104 373 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 ITGB5P18084 799 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 LAG3P18627 525 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 MTHFRP42898 656 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 DSC3Q14574 896 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 PLCB4Q15147 1175 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 TPRNQ4KMQ1 711 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 SPECC1Q5M775 1068 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 KIAA1841Q6NSI8 718 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 KCNT2Q6UVM3 1135 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 TMC5Q6UXY8 1006 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 TMC7Q7Z402 723 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 FAM228AQ86W67 206 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 TMEM173Q86WV6 379 aaPredicted RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 SUMF1Q8NBK3 374 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 BCL7CQ8WUZ0 217 aaPredicted RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 SEPT1Q8WYJ6 367 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 GLG1Q92896 1179 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 EVI5LQ96CN4 794 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 CASD1Q96PB1 797 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 HINFPQ9BQA5 517 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 SENP7Q9BQF6 1050 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 RIOX1Q9H6W3 641 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 RGS18Q9NS28 235 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 MAP3K20Q9NYL2 800 aaKnown RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 ERAP1Q9NZ08 941 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 DBR1Q9UK59 544 aaKnown RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 CA14Q9ULX7 337 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 DUSP12Q9UNI6 340 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 ST3GAL5Q9UNP4 418 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 ZFYVE26Q68DK2 2539 aa6.02□□□□□ -1.45
CHD4-205ENST00000536301 MYH9P35579 1960 aaKnown RBP6.02□□□□□ -1.45
CHD4-205ENST00000536301 KDM3AQ9Y4C1 1321 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 MEIS2O14770 477 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 ZNF213O14771 459 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 RPS6KA5O75582 802 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 CFHP08603 1231 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 SP9P0CG40 484 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 SRGAP2BP0DMP2 458 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 PCP11498 1178 aaKnown RBP6.01□□□□□ -1.45
CHD4-205ENST00000536301 HOXB3P14651 431 aaPredicted RBP6.01□□□□□ -1.45
CHD4-205ENST00000536301 CA8P35219 290 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 METAP2P50579 478 aaKnown RBP eCLIP6.01□□□□□ -1.458e-9■■■□□ 15.8
CHD4-205ENST00000536301 ATXN1P54253 815 aaKnown RBP6.01□□□□□ -1.45
CHD4-205ENST00000536301 FAM189BP81408 668 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 KRT76Q01546 638 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 ITIH3Q06033 890 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 TDGQ13569 410 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 GRM4Q14833 912 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 UBE2SQ16763 222 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 ST3GAL2Q16842 350 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 CLLU1OSQ5K130 101 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 IER5Q5VY09 327 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 PDE12Q6L8Q7 609 aaKnown RBP6.01□□□□□ -1.45
CHD4-205ENST00000536301 CES5AQ6NT32 575 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 MTHFD1LQ6UB35 978 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 IQCA1Q86XH1 822 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 MAML2Q8IZL2 1156 aaPredicted RBP6.01□□□□□ -1.45
CHD4-205ENST00000536301 SLC39A11Q8N1S5 342 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 MRPL43Q8N983 215 aaKnown RBP6.01□□□□□ -1.45
CHD4-205ENST00000536301 SLC22A17Q8WUG5 538 aa6.01□□□□□ -1.45
CHD4-205ENST00000536301 ZNF668Q96K58 619 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms