RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NASPP49321 788 aaPredicted RBP1.55□□□□□ -2.16
COPB1-212ENST00000534771 MRE11P49959 708 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 SLC25A3Q00325 362 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 MAP4K2Q12851 820 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 EIF4HQ15056 248 aaKnown RBP1.55□□□□□ -2.16
COPB1-212ENST00000534771 PTPAQ15257 358 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 KIZQ2M2Z5 673 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 SLC35F1Q5T1Q4 408 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 BTBD8Q5XKL5 378 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 USP53Q70EK8 1073 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 OTOP2Q7RTS6 562 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 FILIP1Q7Z7B0 1213 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 PRIMA1Q86XR5 153 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 VRK3Q8IV63 474 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 RTKN2Q8IZC4 609 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 SHCBP1Q8NEM2 672 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 WDR48Q8TAF3 677 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 KCTD13Q8WZ19 329 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 MIEF2Q96C03 454 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 GPRASP2Q96D09 838 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 C1orf159Q96HA4 380 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 WNK4Q96J92 1243 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 GALNT8Q9NY28 637 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 PPARGC1AQ9UBK2 798 aaKnown RBP1.55□□□□□ -2.16
COPB1-212ENST00000534771 Q9UFV3 132 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 FAM184BQ9ULE4 1060 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 SH3BP1Q9Y3L3 701 aa1.55□□□□□ -2.16
COPB1-212ENST00000534771 A0A1W2PRX2 142 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 FAM47E-STBD1D6RA91 191 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 AGRPO00253 132 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 TRAF5O00463 557 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 DDAH1O94760 285 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 CAPNS1P04632 268 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 PTGS1P23219 599 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 GRK2P25098 689 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 GRK3P35626 688 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 ADCY8P40145 1251 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 GRIA2P42262 883 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 MAN2A2P49641 1150 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 SCNN1GP51170 649 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 PPP2R2AP63151 447 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 IL13RA1P78552 427 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 CD83Q01151 205 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 HGFACQ04756 655 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 HABP4Q5JVS0 413 aaKnown RBP1.54□□□□□ -2.16
COPB1-212ENST00000534771 OLFML1Q6UWY5 402 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 C6orf15Q6UXA7 325 aaPredicted RBP1.54□□□□□ -2.16
COPB1-212ENST00000534771 LBX2Q6XYB7 198 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 EP400NLQ6ZTU2 488 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 HDGFL2Q7Z4V5 671 aaPredicted RBP1.54□□□□□ -2.16
COPB1-212ENST00000534771 FAM178BQ8IXR5 827 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 SYNE4Q8N205 404 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 FAM169BQ8N8A8 192 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 Q8N9P0 234 aaPredicted RBP1.54□□□□□ -2.16
COPB1-212ENST00000534771 OR14K1Q8NGZ2 314 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 SLC25A43Q8WUT9 341 aaPredicted RBP1.54□□□□□ -2.16
COPB1-212ENST00000534771 DCAF4Q8WV16 495 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 RABGGTAQ92696 567 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 SEC16BQ96JE7 1060 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 ZFYVE21Q9BQ24 234 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 PHF20Q9BVI0 1012 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 BTBD2Q9BX70 525 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 KIAA1683Q9H0B3 1180 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 AGO3Q9H9G7 860 aaKnown RBP1.54□□□□□ -2.16
COPB1-212ENST00000534771 INCENPQ9NQS7 918 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 RIC8BQ9NVN3 520 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 FZD1Q9UP38 647 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 COL4A3Q01955 1670 aa1.54□□□□□ -2.16
COPB1-212ENST00000534771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP1.53□□□□□ -2.16
COPB1-212ENST00000534771 FAM90A27PA6NNH2 459 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 GOLGA6L6A8MZA4 724 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 KIAA0355O15063 1070 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 B3GALT2O43825 422 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 SUSD5O60279 629 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 DLX3O60479 287 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 FAM20BO75063 409 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 MFAP3LO75121 409 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 PPFIA4O75335 1185 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 SOD2P04179 222 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 ITGB1P05556 798 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 PTPN1P18031 435 aaKnown RBP1.53□□□□□ -2.16
COPB1-212ENST00000534771 GJA8P48165 433 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 SMAD3P84022 425 aaKnown RBP1.53□□□□□ -2.16
COPB1-212ENST00000534771 TAP1Q03518 808 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 RIN1Q13671 783 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 MOGSQ13724 837 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 TOB2Q14106 344 aaPredicted RBP1.53□□□□□ -2.16
COPB1-212ENST00000534771 STILQ15468 1287 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 RABL3Q5HYI8 236 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 LY6G5CQ5SRR4 150 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 KCNT2Q6UVM3 1135 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 Q6ZRM9 215 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 USP43Q70EL4 1123 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 ADGRG3Q86Y34 549 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 IFNL3Q8IZI9 196 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 ZNF276Q8N554 614 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 PROKR1Q8TCW9 393 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 SH3RF2Q8TEC5 729 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 LPPQ93052 612 aa1.53□□□□□ -2.16
COPB1-212ENST00000534771 LENG9Q96B70 501 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms