RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 RPS6KA5O75582 802 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 ADCY7P51828 1080 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 FUT2Q10981 343 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 PPP1R18Q6NYC8 613 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 APOA5Q6Q788 366 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 MICAL1Q8TDZ2 1067 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 ADAM2Q99965 735 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 TLE6Q9H808 572 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 TECTAO75443 2155 aa24.29■■□□□ 1.48
SSH3-211ENST00000534112 ZNF318Q5VUA4 2279 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 SMCO2A6NFE2 343 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 LOC730098B7Z3J9 87 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 DDX39AO00148 427 aaKnown RBP24.28■■□□□ 1.48
SSH3-211ENST00000534112 SREBF1P36956 1147 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 UBE3AQ05086 875 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 SPOUT1Q5T280 376 aaKnown RBP24.28■■□□□ 1.48
SSH3-211ENST00000534112 FAM102BQ5T8I3 360 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 FAM160B1Q5W0V3 765 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 TMEM40Q8WWA1 233 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 AAASQ9NRG9 546 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 RGS18Q9NS28 235 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 C1orf112Q9NSG2 853 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 TMEM260Q9NX78 707 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 ST3GAL5Q9UNP4 418 aa24.28■■□□□ 1.48
SSH3-211ENST00000534112 USP15Q9Y4E8 981 aaPredicted RBP24.28■■□□□ 1.48
SSH3-211ENST00000534112 DENND3A2RUS2 1198 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 TBKBP1A7MCY6 615 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 ZNF76P36508 570 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 AP3B2Q13367 1082 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 SLC24A5Q71RS6 500 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 NIPA1Q7RTP0 329 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 BMP8AQ7Z5Y6 402 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 CCDC60Q8IWA6 550 aaPredicted RBP24.27■■□□□ 1.48
SSH3-211ENST00000534112 ANO2Q9NQ90 1003 aa24.27■■□□□ 1.48
SSH3-211ENST00000534112 RNF216Q9NWF9 866 aaPredicted RBP24.27■■□□□ 1.48
SSH3-211ENST00000534112 ZBTB42B2RXF5 422 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 C9IYK1 514 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 PER2O15055 1255 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 GPR182O15218 404 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 CLK2P49760 499 aaKnown RBP24.26■■□□□ 1.47
SSH3-211ENST00000534112 CBX2Q14781 532 aaPredicted RBP24.26■■□□□ 1.47
SSH3-211ENST00000534112 RTN1Q16799 776 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 ZNF484Q5JVG2 852 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 ODR4Q5SWX8 454 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 PDXDC2PQ6P474 469 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 TRIM67Q6ZTA4 783 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 GLT8D2Q9H1C3 349 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 ZNF302Q9NR11 478 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 TLR9Q9NR96 1032 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 BARHL2Q9NY43 387 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 BRPF3Q9ULD4 1205 aa24.26■■□□□ 1.47
SSH3-211ENST00000534112 TMEM221A6NGB7 291 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 FAM86B1E9PN63 330 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 hCG_1984214I3L0E3 225 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 M0R296 226 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 DHX15O43143 795 aaKnown RBP24.25■■□□□ 1.47
SSH3-211ENST00000534112 ZBTB43O43298 467 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 FGF18O76093 207 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 FAM86B2P0C5J1 330 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 ATP4AP20648 1035 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 SWSAP1Q6NVH7 229 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 PLA2G4DQ86XP0 818 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 ZNF713Q8N859 430 aaPredicted RBP24.25■■□□□ 1.47
SSH3-211ENST00000534112 PHF7Q9BWX1 381 aaPredicted RBP24.25■■□□□ 1.47
SSH3-211ENST00000534112 TYW1Q9NV66 732 aaKnown RBP24.25■■□□□ 1.47
SSH3-211ENST00000534112 COL1A2P08123 1366 aa24.25■■□□□ 1.47
SSH3-211ENST00000534112 ERVFC1P60507 584 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 IRX6P78412 446 aaPredicted RBP24.24■■□□□ 1.47
SSH3-211ENST00000534112 ZXDAP98168 799 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 RBM10P98175 930 aaKnown RBP24.24■■□□□ 1.47
SSH3-211ENST00000534112 EXOSC10Q01780 885 aaKnown RBP24.24■■□□□ 1.47
SSH3-211ENST00000534112 KIZQ2M2Z5 673 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 MIS18BP1Q6P0N0 1132 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 THNSL1Q8IYQ7 743 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 VN1R2Q8NFZ6 395 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 PBXIP1Q96AQ6 731 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 TCEANC2Q96MN5 208 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 NEK1Q96PY6 1258 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 CDCA3Q99618 268 aaPredicted RBP24.24■■□□□ 1.47
SSH3-211ENST00000534112 HCSTQ9UBK5 93 aa24.24■■□□□ 1.47
SSH3-211ENST00000534112 CRYBB1P53674 252 aaPredicted RBP24.23■■□□□ 1.47
SSH3-211ENST00000534112 FAM189BP81408 668 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 DUSP6Q16828 381 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 RNF20Q5VTR2 975 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 COLGALT1Q8NBJ5 622 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 RPGRIP1Q96KN7 1286 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 PPP1R16BQ96T49 567 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 OSMRQ99650 979 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 ATP6V0A4Q9HBG4 840 aa24.23■■□□□ 1.47
SSH3-211ENST00000534112 FAM217BQ9NTX9 383 aaPredicted RBP24.23■■□□□ 1.47
SSH3-211ENST00000534112 IGLV3-22A0A075B6J6 115 aa24.22■■□□□ 1.47
SSH3-211ENST00000534112 IPO5O00410 1097 aaKnown RBP24.22■■□□□ 1.47
SSH3-211ENST00000534112 C22orf31O95567 290 aa24.22■■□□□ 1.47
SSH3-211ENST00000534112 FGFR1P11362 822 aa24.22■■□□□ 1.47
SSH3-211ENST00000534112 JAKMIP3Q5VZ66 844 aa24.22■■□□□ 1.47
SSH3-211ENST00000534112 PDE12Q6L8Q7 609 aaKnown RBP24.22■■□□□ 1.47
SSH3-211ENST00000534112 DHX32Q7L7V1 743 aaKnown RBP24.22■■□□□ 1.47
SSH3-211ENST00000534112 FAM228AQ86W67 206 aa24.22■■□□□ 1.47
SSH3-211ENST00000534112 CKAP2LQ8IYA6 745 aa24.22■■□□□ 1.47
SSH3-211ENST00000534112 SUSD6Q92537 303 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms