RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 HOXA2O43364 376 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 RPS6KA5O75582 802 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 PDGFBP01127 241 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-223ENST00000533079 KIF5BP33176 963 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 TMEM62Q0P6H9 643 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 PLPP4Q5VZY2 271 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 ASTLQ6HA08 431 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-223ENST00000533079 CES5AQ6NT32 575 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 SYCE2Q6PIF2 218 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 RALYLQ86SE5 291 aaKnown RBP14.23□□□□□ -0.13
CAPN1-223ENST00000533079 TMEM105Q8N8V8 129 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 NKD2Q969F2 451 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-223ENST00000533079 LZTS2Q9BRK4 669 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 ERVK-5Q9HDB9 667 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 JADE2Q9NQC1 790 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 TMEM161AQ9NX61 479 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 SLC9A2Q9UBY0 812 aa14.23□□□□□ -0.13
CAPN1-223ENST00000533079 COL1A2P08123 1366 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 C9IYK1 514 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 GPR182O15218 404 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 DDAH1O94760 285 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 CLCN5P51795 746 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 NFX1Q12986 1120 aaKnown RBP14.22□□□□□ -0.13
CAPN1-223ENST00000533079 PLCB4Q15147 1175 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 MTHFD1LQ6UB35 978 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 TEX2Q8IWB9 1127 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 LRRC43Q8N309 656 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 CTCFLQ8NI51 663 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-223ENST00000533079 PCYT2Q99447 389 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 ADAM2Q99965 735 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 CWH43Q9H720 699 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 ATP6V0A4Q9HBG4 840 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
CAPN1-223ENST00000533079 TYW1Q9NV66 732 aaKnown RBP14.22□□□□□ -0.13
CAPN1-223ENST00000533079 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-223ENST00000533079 BRD1O95696 1058 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 PDE4AP27815 886 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 MTHFRP42898 656 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 ID4P47928 161 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 STAT5BP51692 787 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 KRT17Q04695 432 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 TMEM266Q2M3C6 531 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 SMC5Q8IY18 1101 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 ZDHHC14Q8IZN3 488 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 ZBTB10Q96DT7 871 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 SDF4Q9BRK5 362 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 TMEM117Q9H0C3 514 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 ADAM7Q9H2U9 754 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 MFSD1Q9H3U5 465 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 POMKQ9H5K3 350 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 PSTPIP2Q9H939 334 aa14.21□□□□□ -0.13
CAPN1-223ENST00000533079 CACNA1HO95180 2353 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 C2CD4DB7Z1M9 353 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 MGEA5O60502 916 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 SP100P23497 879 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-223ENST00000533079 GNAQP50148 359 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 ACTR2P61160 394 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 SMC1AQ14683 1233 aaKnown RBP14.2□□□□□ -0.14
CAPN1-223ENST00000533079 FAM102BQ5T8I3 360 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 LLGL2Q6P1M3 1020 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 PLCD3Q8N3E9 789 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 TDRD5Q8NAT2 981 aaKnown RBP14.2□□□□□ -0.14
CAPN1-223ENST00000533079 TRAPPC12Q8WVT3 735 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 PIBF1Q8WXW3 757 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 ZNF558Q96NG5 402 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 MTA3Q9BTC8 594 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 KCNH7Q9NS40 1196 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 DZANK1Q9NVP4 752 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 PKD2L1Q9P0L9 805 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 USTQ9Y2C2 406 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 NOC2LQ9Y3T9 749 aaKnown RBP14.2□□□□□ -0.14
CAPN1-223ENST00000533079 HCFC2Q9Y5Z7 792 aa14.2□□□□□ -0.14
CAPN1-223ENST00000533079 CARNS1A5YM72 827 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 HIDE1A8MVS5 230 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 HBP1O60381 514 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 CYP21A2P08686 494 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 CRYBB1P53674 252 aaPredicted RBP14.19□□□□□ -0.14
CAPN1-223ENST00000533079 FAM189BP81408 668 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 APOBRQ0VD83 1088 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 BMS1Q14692 1282 aaKnown RBP14.19□□□□□ -0.14
CAPN1-223ENST00000533079 KIAA1841Q6NSI8 718 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 KCNT2Q6UVM3 1135 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 FRMD5Q7Z6J6 570 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 ZNF654Q8IZM8 581 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 ABI1Q8IZP0 508 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 TMEM40Q8WWA1 233 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 RSPH1Q8WYR4 309 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 SENP2Q9HC62 589 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 ST3GAL5Q9UNP4 418 aa14.19□□□□□ -0.14
CAPN1-223ENST00000533079 DENND4AQ7Z401 1863 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 IGKV6D-21A0A0A0MT36 114 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 ATG7O95352 703 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 FGFR1P11362 822 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 IBSPP21815 317 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-223ENST00000533079 FAM160B1Q5W0V3 765 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 TMC7Q7Z402 723 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms