RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 FDPSP14324 419 aaKnown RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 DSG3P32926 999 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 PSMC4P43686 418 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 XXYLT1Q8NBI6 393 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 CYP2C9P11712 490 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 KRT81Q14533 505 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 URGCPQ8TCY9 931 aa17.09■□□□□ 0.33
PPFIA1-222ENST00000532504 GCLMP48507 274 aa17.08■□□□□ 0.33
PPFIA1-222ENST00000532504 BPIFB4P59827 614 aa17.08■□□□□ 0.33
PPFIA1-222ENST00000532504 GOLGA8FQ08AF8 430 aa17.08■□□□□ 0.33
PPFIA1-222ENST00000532504 GOLGA8DPQ0D2H9 430 aa17.08■□□□□ 0.33
PPFIA1-222ENST00000532504 BUB1O43683 1085 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 PRR29P0C7W0 189 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 TCF7P36402 384 aaPredicted RBP17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 CALCOCO2Q13137 446 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 HAUS6Q7Z4H7 955 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 GFPT2O94808 682 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 NR3C1P04150 777 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 IQCDQ96DY2 449 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 TRIM31Q9BZY9 425 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 RIC1Q4ADV7 1423 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 GAKO14976 1311 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 ARHGEF37A1IGU5 675 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 EYA4O95677 639 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 NMT1P30419 496 aaKnown RBP17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 CASP14P31944 242 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 KCNJ6P48051 423 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 CPT1AP50416 773 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 LAMC2Q13753 1193 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 DAAM2Q86T65 1068 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 CLMNQ96JQ2 1002 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 MOV10L1Q9BXT6 1211 aaKnown RBP17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.32
PPFIA1-222ENST00000532504 CTDNEP1O95476 244 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 ZNF365Q70YC5 407 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 CEP112Q8N8E3 955 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 TUFT1Q9NNX1 390 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 VWA5AO00534 786 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 PPP1R21Q6ZMI0 780 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 TMEM60Q9H2L4 133 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 NMRK2Q9NPI5 230 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 FOXN1O15353 648 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 NPEPPSP55786 919 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 RGMBQ6NW40 437 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 SHC4Q6S5L8 630 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 TRIM50Q86XT4 487 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 FAM169AQ9Y6X4 670 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 GAS8O95995 478 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 LRRC63Q05C16 580 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 GABPAQ06546 454 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 SEC23AQ15436 765 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.07■□□□□ 0.32
PPFIA1-222ENST00000532504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.07■□□□□ 0.322e-9■■■■□ 21.1
PPFIA1-222ENST00000532504 SMIM23A6NLE4 172 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 RPS6KA1Q15418 735 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 NAPGQ99747 312 aaPredicted RBP17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 MIS12Q9H081 205 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 DGAT1O75907 488 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 STK10O94804 968 aaKnown RBP17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 PRKCBP05771 671 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 U2AF2P26368 475 aaKnown RBP eCLIP17.06■□□□□ 0.323e-12■■■■□ 21.2
PPFIA1-222ENST00000532504 LEKR1Q6ZMV7 388 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 TAF1DQ9H5J8 278 aaPredicted RBP17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 PDIA5Q14554 519 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 CCDC91Q7Z6B0 441 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 H2AFZP0C0S5 128 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 ANXA13P27216 316 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 GPC3P51654 580 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 H2AFVQ71UI9 128 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 FAM133AQ8N9E0 248 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 LTN1O94822 1766 aa17.06■□□□□ 0.32
PPFIA1-222ENST00000532504 IER5Q5VY09 327 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 NAP1L3Q99457 506 aaPredicted RBP17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 RNF8O76064 485 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 BSPRYQ5W0U4 402 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 INTS8Q75QN2 995 aaKnown RBP17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 SCN4BQ8IWT1 228 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 PPP1R14CQ8TAE6 165 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 PRCPP42785 496 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 ACTR2P61160 394 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 CFAP58Q5T655 872 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 LMBRD2Q68DH5 695 aaPredicted RBP17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 EFCAB12Q6NXP0 572 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 NDST4Q9H3R1 872 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 MAFGO15525 162 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 DGKZQ13574 1117 aa17.05■□□□□ 0.32
PPFIA1-222ENST00000532504 EMC2Q15006 297 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms