RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CELF4Q9BZC1 486 aaKnown RBP16.05■□□□□ 0.16
NKX3-1-202ENST00000523261 DZANK1Q9NVP4 752 aa16.05■□□□□ 0.16
NKX3-1-202ENST00000523261 ANKRD11Q6UB99 2663 aaPredicted RBP16.05■□□□□ 0.16
NKX3-1-202ENST00000523261 FASNP49327 2511 aaKnown RBP16.05■□□□□ 0.16
NKX3-1-202ENST00000523261 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 DCDC2BA2VCK2 349 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 C9IYK1 514 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 GCOM1H8Y6P7 765 aaPredicted RBP16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 M0QZ92 97 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 POLR2MP0CAP2 368 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 HAND2P61296 217 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 MTMR8Q96EF0 704 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 ADAM2Q99965 735 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 ERAP1Q9NZ08 941 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 RTEL1Q9NZ71 1219 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 DLGAP2Q9P1A6 1054 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 WNT16Q9UBV4 365 aa16.04■□□□□ 0.16
NKX3-1-202ENST00000523261 CFHP08603 1231 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 PARP1P09874 1014 aaKnown RBP16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 FGFR1P11362 822 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 PCP11498 1178 aaKnown RBP16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 PPM1AP35813 382 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 PBX3P40426 434 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 KRT17Q04695 432 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 NFX1Q12986 1120 aaKnown RBP16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 VARS2Q5ST30 1063 aaKnown RBP16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 LRRC55Q6ZSA7 311 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 SLC24A5Q71RS6 500 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 OTOP3Q7RTS5 596 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 TBC1D10CQ8IV04 446 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 C1orf210Q8IVY1 113 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 GPR161Q8N6U8 529 aaKnown RBP16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 ZNF558Q96NG5 402 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 KAT14Q9H8E8 782 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 TBC1D17Q9HA65 648 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 RGS18Q9NS28 235 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 C1orf112Q9NSG2 853 aa16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 CDV3Q9UKY7 258 aaKnown RBP16.03■□□□□ 0.16
NKX3-1-202ENST00000523261 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 TTC41PQ6P2S7 1318 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 RRN3P2A6NIE6 340 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 PRR5-ARHGAP8B1AHC4 643 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 ZBTB5O15062 677 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 KINO60870 393 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 DCNP07585 359 aaKnown RBP16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 INSRRP14616 1297 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 ARHGAP8P85298 464 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 SPECC1Q5M775 1068 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 FAM43BQ6ZT52 329 aaPredicted RBP16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 ESR2Q92731 530 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 RTKNQ9BST9 563 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 TMEM161AQ9NX61 479 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 SPG21Q9NZD8 308 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 NCDNQ9UBB6 729 aa16.02■□□□□ 0.16
NKX3-1-202ENST00000523261 NEDD4P46934 1319 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 DENND3A2RUS2 1198 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 TRIM6-TRIM34B2RNG4 842 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 MS4A1P11836 297 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 EPCAMP16422 314 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 RFX1P22670 979 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 LMNB2Q03252 620 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 TMC5Q6UXY8 1006 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 CCDC149Q6ZUS6 474 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 STAG2Q8N3U4 1231 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 GLG1Q92896 1179 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 TMEM117Q9H0C3 514 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 ATP6V0A4Q9HBG4 840 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 IGSF9Q9P2J2 1179 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 PCDHA2Q9Y5H9 948 aa16.01■□□□□ 0.15
NKX3-1-202ENST00000523261 POTEMA6NI47 508 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 FAM189BP81408 668 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 KRT76Q01546 638 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 POTEGQ6S5H5 508 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 GPR149Q86SP6 731 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 MAML2Q8IZL2 1156 aaPredicted RBP16■□□□□ 0.15
NKX3-1-202ENST00000523261 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
NKX3-1-202ENST00000523261 CASD1Q96PB1 797 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 SMARCAD1Q9H4L7 1026 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 RNF19AQ9NV58 838 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 CA14Q9ULX7 337 aa16■□□□□ 0.15
NKX3-1-202ENST00000523261 NOC2LQ9Y3T9 749 aaKnown RBP16■□□□□ 0.15
NKX3-1-202ENST00000523261 ATP9AO75110 1047 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 RPS6KA5O75582 802 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 CXCL14O95715 111 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 CCDC178Q5BJE1 867 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 PHLDB3Q6NSJ2 640 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 SLC39A11Q8N1S5 342 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 SLC22A17Q8WUG5 538 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 TRAPPC12Q8WVT3 735 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 TMEM40Q8WWA1 233 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 ELAC1Q9H777 363 aaKnown RBP15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 CDHR5Q9HBB8 845 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
NKX3-1-202ENST00000523261 SIT1Q9Y3P8 196 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms