RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 CD52P31358 61 aa26.01■■□□□ 1.75
CLDND1-230ENST00000514537 CCDC85BQ15834 202 aaPredicted RBP26.01■■□□□ 1.75
CLDND1-230ENST00000514537 TRMT1LQ7Z2T5 733 aaKnown RBP26.01■■□□□ 1.75
CLDND1-230ENST00000514537 NEK8Q86SG6 692 aa26.01■■□□□ 1.75
CLDND1-230ENST00000514537 RDM1Q8NG50 284 aa26.01■■□□□ 1.75
CLDND1-230ENST00000514537 DDX25Q9UHL0 483 aaKnown RBP26.01■■□□□ 1.75
CLDND1-230ENST00000514537 CEP131Q9UPN4 1083 aa26.01■■□□□ 1.75
CLDND1-230ENST00000514537 LPXNO60711 386 aa26■■□□□ 1.75
CLDND1-230ENST00000514537 GRB10Q13322 594 aa26■■□□□ 1.75
CLDND1-230ENST00000514537 LETM2Q2VYF4 491 aa26■■□□□ 1.75
CLDND1-230ENST00000514537 PPP4R3AQ6IN85 833 aa26■■□□□ 1.75
CLDND1-230ENST00000514537 NRBP2Q9NSY0 501 aa26■■□□□ 1.75
CLDND1-230ENST00000514537 GTPBP6O43824 516 aaPredicted RBP25.99■■□□□ 1.75
CLDND1-230ENST00000514537 SLC37A4O43826 429 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 OATP04181 439 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 UGCGQ16739 394 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 PIK3AP1Q6ZUJ8 805 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 MIER3Q7Z3K6 550 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 YME1L1Q96TA2 773 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 PRDM6Q9NQX0 595 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 VCANP13611 3396 aa25.99■■□□□ 1.75
CLDND1-230ENST00000514537 MAGEB2O15479 319 aa25.98■■□□□ 1.75
CLDND1-230ENST00000514537 JAK2O60674 1132 aa25.98■■□□□ 1.75
CLDND1-230ENST00000514537 GCFC2P16383 781 aaKnown RBP25.98■■□□□ 1.75
CLDND1-230ENST00000514537 ST3GAL1Q11201 340 aa25.98■■□□□ 1.75
CLDND1-230ENST00000514537 EARS2Q5JPH6 523 aaKnown RBP25.98■■□□□ 1.75
CLDND1-230ENST00000514537 RTN4RL1Q86UN2 441 aaPredicted RBP25.98■■□□□ 1.75
CLDND1-230ENST00000514537 FTHL17Q9BXU8 183 aa25.98■■□□□ 1.75
CLDND1-230ENST00000514537 SUGCTQ9HAC7 445 aa25.98■■□□□ 1.75
CLDND1-230ENST00000514537 PADI3Q9ULW8 664 aa25.98■■□□□ 1.75
CLDND1-230ENST00000514537 LIMCH1Q9UPQ0 1083 aa25.98■■□□□ 1.75
CLDND1-230ENST00000514537 KRT2P35908 639 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 PRKCEQ02156 737 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 PAK2Q13177 524 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 METTL13Q8N6R0 699 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 LINC01599Q8WXQ3 324 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 TNFRSF25Q93038 417 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 FAM20AQ96MK3 541 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 KIF2CQ99661 725 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 CDHR5Q9HBB8 845 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 KCNMB3Q9NPA1 279 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 MTUS1Q9ULD2 1270 aa25.97■■□□□ 1.75
CLDND1-230ENST00000514537 CUL9Q8IWT3 2517 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 PRRC2BQ5JSZ5 2229 aaKnown RBP25.96■■□□□ 1.75
CLDND1-230ENST00000514537 SIP14410 1827 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 NR5A1Q13285 461 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 KRT40Q6A162 431 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 MICALL1Q8N3F8 863 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 LINC01465Q8N7H1 131 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 NAP1L4Q99733 375 aaKnown RBP25.96■■□□□ 1.75
CLDND1-230ENST00000514537 C17orf80Q9BSJ5 609 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 BRMS1Q9HCU9 246 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 LMCD1Q9NZU5 365 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 GINS2Q9Y248 185 aa25.96■■□□□ 1.75
CLDND1-230ENST00000514537 CCNT1O60563 726 aaKnown RBP25.95■■□□□ 1.74
CLDND1-230ENST00000514537 FAM43BQ6ZT52 329 aaPredicted RBP25.95■■□□□ 1.74
CLDND1-230ENST00000514537 GDPD5Q8WTR4 605 aa25.95■■□□□ 1.74
CLDND1-230ENST00000514537 TSPYL2Q9H2G4 693 aaPredicted RBP25.95■■□□□ 1.74
CLDND1-230ENST00000514537 NOC2LQ9Y3T9 749 aaKnown RBP25.95■■□□□ 1.74
CLDND1-230ENST00000514537 FAM205CA6NFA0 338 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 TBX3O15119 743 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 GPR32O75388 356 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 STBD1O95210 358 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 PPP2R5CQ13362 524 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 TARBP2Q15633 366 aaKnown RBP25.94■■□□□ 1.74
CLDND1-230ENST00000514537 TMEM266Q2M3C6 531 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 EFCAB12Q6NXP0 572 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 CRIPAKQ8N1N5 446 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 TMEM40Q8WWA1 233 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 HAS1Q92839 578 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 SAMD11Q96NU1 681 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 COL25A1Q9BXS0 654 aaPredicted RBP25.94■■□□□ 1.74
CLDND1-230ENST00000514537 NIFKQ9BYG3 293 aaKnown RBP25.94■■□□□ 1.74
CLDND1-230ENST00000514537 TMX1Q9H3N1 280 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 RC3H2Q9HBD1 1191 aaKnown RBP25.94■■□□□ 1.74
CLDND1-230ENST00000514537 ERVK-5Q9HDB9 667 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 VAV3Q9UKW4 847 aa25.94■■□□□ 1.74
CLDND1-230ENST00000514537 MYH9P35579 1960 aaKnown RBP25.93■■□□□ 1.74
CLDND1-230ENST00000514537 SPTBN5Q9NRC6 3674 aaKnown RBP25.93■■□□□ 1.74
CLDND1-230ENST00000514537 EML1O00423 815 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 RPS6KA5O75582 802 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 MMP1P03956 469 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 VTNP04004 478 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 TMOD1P28289 359 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 CLCN3P51790 818 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 CRYBB1P53674 252 aaPredicted RBP25.93■■□□□ 1.74
CLDND1-230ENST00000514537 NFX1Q12986 1120 aaKnown RBP25.93■■□□□ 1.74
CLDND1-230ENST00000514537 KIZQ2M2Z5 673 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 XKR3Q5GH77 459 aa25.93■■□□□ 1.74
CLDND1-230ENST00000514537 REV3LO60673 3130 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 BTBD18B2RXH4 712 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 EPC2Q52LR7 807 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 LRRC71Q8N4P6 559 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 FBXO22Q8NEZ5 403 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 ATXN2LQ8WWM7 1075 aaKnown RBP25.92■■□□□ 1.74
CLDND1-230ENST00000514537 ZNF689Q96CS4 500 aaPredicted RBP25.92■■□□□ 1.74
CLDND1-230ENST00000514537 PPP1R16BQ96T49 567 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 THEGQ9P2T0 379 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 ST3GAL5Q9UNP4 418 aa25.92■■□□□ 1.74
CLDND1-230ENST00000514537 COL4A6Q14031 1691 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms