RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 CHPFQ8IZ52 775 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 RHOBTB2Q9BYZ6 727 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 SLC13A1Q9BZW2 595 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 CDH19Q9H159 772 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 KCNK12Q9HB15 430 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 LUC7LQ9NQ29 371 aaKnown RBP5.79□□□□□ -1.48
NIPBL-207ENST00000513819 CCM2LQ9NUG4 571 aaPredicted RBP5.79□□□□□ -1.48
NIPBL-207ENST00000513819 USP36Q9P275 1121 aaKnown RBP5.79□□□□□ -1.48
NIPBL-207ENST00000513819 ZNF180Q9UJW8 692 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 NOB1Q9ULX3 412 aaKnown RBP5.79□□□□□ -1.48
NIPBL-207ENST00000513819 FAN1Q9Y2M0 1017 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 PCDHGA9Q9Y5G4 932 aaKnown RBP5.79□□□□□ -1.48
NIPBL-207ENST00000513819 PCDHGA8Q9Y5G5 932 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 PCDHGA7Q9Y5G6 932 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 PCDHGA6Q9Y5G7 932 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 PCDHGA3Q9Y5H0 932 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 PCDHGA2Q9Y5H1 932 aa5.79□□□□□ -1.48
NIPBL-207ENST00000513819 E2F8A0AVK6 867 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 ZNF839A8K0R7 811 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 NFIBO00712 420 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 PRPF6O94906 941 aaKnown RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 ABLIM3O94929 683 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 SNUPNO95149 360 aaKnown RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 C8BP07358 591 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 ENO2P09104 434 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 ZSCAN20P17040 1043 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 FBLN1P23142 703 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 RGS3P49796 1198 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 NKX3-2P78367 333 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 ALDH6A1Q02252 535 aaKnown RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 MOGSQ13724 837 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 MYBPC3Q14896 1274 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 ACAP2Q15057 778 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 TOR2AQ5JU69 321 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 PHF19Q5T6S3 580 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 OLFML2BQ68BL8 750 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 CCDC62Q6P9F0 684 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 AMOTL1Q8IY63 956 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 JPH3Q8WXH2 748 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 FAM168AQ92567 244 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 FERMT2Q96AC1 680 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 EAF2Q96CJ1 260 aaPredicted RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 MAML3Q96JK9 1138 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 ACAP3Q96P50 834 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 DIRC2Q96SL1 478 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 AMNQ9BXJ7 453 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 QRSL1Q9H0R6 528 aaKnown RBP5.78□□□□□ -1.48
NIPBL-207ENST00000513819 DNAJC28Q9NX36 388 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 HSPBP1Q9NZL4 362 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 KCNG1Q9UIX4 513 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 EDARQ9UNE0 448 aa5.78□□□□□ -1.48
NIPBL-207ENST00000513819 PRSS38A1L453 326 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 TRIM75PA6NK02 468 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 PRPF3O43395 683 aaKnown RBP5.77□□□□□ -1.49
NIPBL-207ENST00000513819 LPLP06858 475 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 NCAM1P13591 858 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 ENPP1P22413 925 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 SRSF2Q01130 221 aaKnown RBP5.77□□□□□ -1.49
NIPBL-207ENST00000513819 CACNB2Q08289 660 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-207ENST00000513819 FSCN1Q16658 493 aaKnown RBP5.77□□□□□ -1.49
NIPBL-207ENST00000513819 UGT8Q16880 541 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 CCDC181Q5TID7 509 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 VASNQ6EMK4 673 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 SLFN12LQ6IEE8 588 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 TIGD7Q6NT04 549 aaPredicted RBP5.77□□□□□ -1.49
NIPBL-207ENST00000513819 UNQ6494/PRO21346Q6UXR6 183 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 PRR23BQ6ZRT6 265 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 TTLL7Q6ZT98 887 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 ZC3H18Q86VM9 953 aaKnown RBP5.77□□□□□ -1.49
NIPBL-207ENST00000513819 E2F7Q96AV8 911 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 ORAI2Q96SN7 254 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 FOXB1Q99853 325 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 NSUN3Q9H649 340 aaKnown RBP5.77□□□□□ -1.49
NIPBL-207ENST00000513819 CNTD2Q9H8S5 307 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 INCENPQ9NQS7 918 aa5.77□□□□□ -1.49
NIPBL-207ENST00000513819 CARMIL2Q6F5E8 1435 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 MYOCOSA0A1B0GUC4 107 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 HRKO00198 91 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 CT47B1P0C2W7 299 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-207ENST00000513819 OSMP13725 252 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 ATF2P15336 505 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 ITGB5P18084 799 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 RECQLP46063 649 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-207ENST00000513819 GLRBP48167 497 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 CDR1P51861 262 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 ROM1Q03395 351 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 ADCY2Q08462 1091 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 SKIDA1Q1XH10 827 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 PITRM1Q5JRX3 1037 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 C14orf80Q86SX3 495 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 STK32CQ86UX6 486 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 LDHDQ86WU2 507 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 MYO1HQ8N1T3 1032 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 CPA6Q8N4T0 437 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 SMARCC2Q8TAQ2 1214 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 CPA5Q8WXQ8 436 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 PRDM12Q9H4Q4 367 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 NGRNQ9NPE2 291 aaKnown RBP5.76□□□□□ -1.49
NIPBL-207ENST00000513819 SIRT5Q9NXA8 310 aa5.76□□□□□ -1.49
NIPBL-207ENST00000513819 GALNT8Q9NY28 637 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms