RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 USP15Q9Y4E8 981 aaPredicted RBP9.67□□□□□ -0.86
CALCOCO2-217ENST00000510356 CFAP54Q96N23 3096 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 TSPY2A6NKD2 308 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 PATL2C9JE40 543 aaKnown RBP9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 LINC01565O15544 149 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 ARIH2O95376 493 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 GNAT1P11488 350 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 CTSOP43234 321 aaPredicted RBP9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 BTG3Q14201 252 aaPredicted RBP9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 PUM1Q14671 1186 aaKnown RBP eCLIP9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 LY6KQ17RY6 165 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 SYDE2Q5VT97 1194 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 KCNV1Q6PIU1 500 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 SLC30A10Q6XR72 485 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 SEPT14Q6ZU15 432 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 ATP6V0A1Q93050 837 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 CLEC1BQ9P126 229 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 PLAGL2Q9UPG8 496 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 USP34Q70CQ2 3546 aa9.66□□□□□ -0.86
CALCOCO2-217ENST00000510356 ADGRA3Q8IWK6 1321 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 WDR19Q8NEZ3 1342 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 C17orf102A2RUQ5 167 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 CLCN5P51795 746 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 MTMR3Q13615 1198 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 MCF2L2Q86YR7 1114 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 SIX5Q8N196 739 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 APPBP2Q92624 585 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 CDCA3Q99618 268 aaPredicted RBP9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 ESYT1Q9BSJ8 1104 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 DDX41Q9UJV9 622 aaKnown RBP9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 TNNQ9UQP3 1299 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 NR2E1Q9Y466 385 aa9.65□□□□□ -0.86
CALCOCO2-217ENST00000510356 MYH4Q9Y623 1939 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 CACNA1BQ00975 2339 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 EIF3JO75822 258 aaKnown RBP9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 DKK1O94907 266 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 NRIP1P48552 1158 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 PDE12Q6L8Q7 609 aaKnown RBP9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 FRMD5Q7Z6J6 570 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 IFNL3Q8IZI9 196 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 CHMP4CQ96CF2 233 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 NEK1Q96PY6 1258 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 MFSD1Q9H3U5 465 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 TLE6Q9H808 572 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 SENP2Q9HC62 589 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 SERTAD1Q9UHV2 236 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 SORCS3Q9UPU3 1222 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 MRVI1Q9Y6F6 885 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 MICAL3Q7RTP6 2002 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 KMT2EQ8IZD2 1858 aa9.64□□□□□ -0.87
CALCOCO2-217ENST00000510356 TTLL8A6PVC2 850 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 RNF113AO15541 343 aaKnown RBP9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 GPAA1O43292 621 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 HOXD8P13378 290 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 SLC16A2P36021 539 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZNF200P98182 395 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 UBE3AQ05086 875 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 PPARAQ07869 468 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 DPYDQ12882 1025 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 FAM43BQ6ZT52 329 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 MICAL1Q8TDZ2 1067 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 SUSD6Q92537 303 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 WNT8BQ93098 351 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 NAPBQ9H115 298 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 BCL11AQ9H165 835 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 MTMR7Q9Y216 660 aa9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
CALCOCO2-217ENST00000510356 RALGAPA2Q2PPJ7 1873 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 MED19A0JLT2 244 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 SFI1A8K8P3 1242 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 H3BRB1 525 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 ATG7O95352 703 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZNF286BP0CG31 522 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 TGFB3P10600 412 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 TOP1P11387 765 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 HOXB8P17481 243 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 SDHBP21912 280 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 RNF144AP50876 292 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 CENPCQ03188 943 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 FAM26DQ5JW98 314 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 ARHGEF16Q5VV41 709 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 CMTR2Q8IYT2 770 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 TMEM105Q8N8V8 129 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 KBTBD3Q8NAB2 608 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 KREMEN2Q8NCW0 462 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 SPPL3Q8TCT6 385 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 OSBP2Q969R2 916 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZNF689Q96CS4 500 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 SPATA33Q96N06 139 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms