RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 ETV4P43268 484 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 PABPC4Q13310 644 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■■■■□ 24.1
UBE2D3-218ENST00000505009 TBR1Q16650 682 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 PIK3R6Q5UE93 754 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 IFNL2Q8IZJ0 200 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 TTC9BQ8N6N2 239 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 CHST14Q8NCH0 376 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 CHST13Q8NET6 341 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 DNERQ8NFT8 737 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
UBE2D3-218ENST00000505009 GOLGA6L22H0YM25 854 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 HMGCRP04035 888 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 JMJD7P0C870 316 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 MOGSQ13724 837 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 CXXC5Q7LFL8 322 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 OTOP2Q7RTS6 562 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 RTN4RL1Q86UN2 441 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 SYNPOQ8N3V7 929 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 LMF1Q96S06 567 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 GPR20Q99678 358 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 ASB1Q9Y576 335 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 CD2APQ9Y5K6 639 aa6.91□□□□□ -1.3
UBE2D3-218ENST00000505009 KIF11P52732 1056 aa6.9□□□□□ -1.3
UBE2D3-218ENST00000505009 CDSNQ15517 529 aa6.9□□□□□ -1.3
UBE2D3-218ENST00000505009 TKFCQ3LXA3 575 aa6.9□□□□□ -1.3
UBE2D3-218ENST00000505009 ZNF585AQ6P3V2 769 aa6.9□□□□□ -1.3
UBE2D3-218ENST00000505009 NEIL1Q96FI4 390 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-218ENST00000505009 C1QTNF3Q9BXJ4 246 aa6.9□□□□□ -1.3
UBE2D3-218ENST00000505009 SEC61A2Q9H9S3 476 aa6.9□□□□□ -1.3
UBE2D3-218ENST00000505009 PTPDC1A2A3K4 754 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 PATE3B3GLJ2 98 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 FOXS1O43638 330 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 STAT5BP51692 787 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 PUM1Q14671 1186 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 CDCA2Q69YH5 1023 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 TCTN3Q6NUS6 607 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 DBX2Q6ZNG2 339 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 FILIP1Q7Z7B0 1213 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 DPYSL5Q9BPU6 564 aa6.89□□□□□ -1.31
UBE2D3-218ENST00000505009 A0A0G2JNJ9 132 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 CBX4O00257 560 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 MATN2O00339 956 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 RFPL3O75679 317 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 PCOLCEQ15113 449 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 ARHGAP44Q17R89 818 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 WDR48Q8TAF3 677 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 Q8TCH9 128 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 DVL3Q92997 716 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 FANCLQ9NW38 375 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 Q9UFV3 132 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 FBXO10Q9UK96 956 aa6.88□□□□□ -1.31
UBE2D3-218ENST00000505009 FAM83GA6ND36 823 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 ZNF623O75123 536 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 RGS3P49796 1198 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 RAC3P60763 192 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 ALDH6A1Q02252 535 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 ZNF568Q3ZCX4 644 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 ZMAT1Q5H9K5 638 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 CREB3L3Q68CJ9 461 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 TRIM68Q6AZZ1 485 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 JAZF1Q86VZ6 243 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 PALM2Q8IXS6 379 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 BCL6BQ8N143 479 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 GIMAP8Q8ND71 665 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 KLC2Q9H0B6 622 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 CABP5Q9NP86 173 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 B4GALT6Q9UBX8 382 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 MAGEL2Q9UJ55 1249 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 NR2E1Q9Y466 385 aa6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 MRPL42Q9Y6G3 142 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-218ENST00000505009 SLC9A1P19634 815 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 APEX1P27695 318 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 FLT3P36888 993 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 MRE11P49959 708 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 SLC6A3Q01959 620 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 CFAP100Q494V2 611 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 AGBL4Q5VU57 503 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 HOMER1Q86YM7 354 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 KIAA1958Q8N8K9 716 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 CFHR4Q92496 578 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 DEF6Q9H4E7 631 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 OAZ3Q9UMX2 235 aa6.86□□□□□ -1.31
UBE2D3-218ENST00000505009 ARHGAP6O43182 974 aa6.85□□□□□ -1.31
UBE2D3-218ENST00000505009 KPNA6O60684 536 aa6.85□□□□□ -1.31
UBE2D3-218ENST00000505009 PRLP01236 227 aa6.85□□□□□ -1.31
UBE2D3-218ENST00000505009 FNTBP49356 437 aa6.85□□□□□ -1.31
UBE2D3-218ENST00000505009 TCEA2Q15560 299 aa6.85□□□□□ -1.31
UBE2D3-218ENST00000505009 UBE2R2Q712K3 238 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-218ENST00000505009 SPRED1Q7Z699 444 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms