RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF384Q8TF68 577 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 FAM84BQ96KN1 310 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 PIGSQ96S52 555 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 RIOK1Q9BRS2 568 aaKnown RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 CCSER1Q9C0I3 900 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 ETNK1Q9HBU6 452 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 IL17RBQ9NRM6 502 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 METTL5Q9NRN9 209 aaKnown RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 NKX1-2Q9UD57 310 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 TSKSQ9UJT2 592 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 AJAP1Q9UKB5 411 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 PPP1R9AQ9ULJ8 1098 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 SUGT1Q9Y2Z0 365 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 ZBTB12Q9Y330 459 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 FLT1P17948 1338 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 MYH7BA7E2Y1 1941 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 STAT3P40763 770 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 ABL2P42684 1182 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 TRAPPC10P48553 1259 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 CTCFP49711 727 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 MXRA7P84157 204 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 DR1Q01658 176 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 IKQ13123 557 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 PSMD2Q13200 908 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 MTM1Q13496 603 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 RCSD1Q6JBY9 416 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 LRRC55Q6ZSA7 311 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 DCP1AQ9NPI6 582 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 SEC63Q9UGP8 760 aaKnown RBP8.27□□□□□ -1.09
NEDD9-208ENST00000504387 SWAP70Q9UH65 585 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 MINPP1Q9UNW1 487 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF652Q9Y2D9 606 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 DAAM1Q9Y4D1 1078 aa8.27□□□□□ -1.09
NEDD9-208ENST00000504387 DPPA5A6NC42 116 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 PIAS1O75925 651 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 NCALDP61601 193 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 DRP2Q13474 957 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 ITPK1Q13572 414 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 CUL1Q13616 776 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 FAM26FQ5R3K3 315 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF572Q7Z3I7 529 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF34Q8IZ26 560 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 MREGQ8N565 214 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 RMDN2Q96LZ7 410 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 KIAA1024Q9UPX6 916 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 USP54Q70EL1 1684 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 LMO7Q8WWI1 1683 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 RIMBP2O15034 1052 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 PJA2O43164 708 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 ATMINO43313 823 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-208ENST00000504387 GNAT1P11488 350 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 NR2F2P24468 414 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
NEDD9-208ENST00000504387 MARCKSL1P49006 195 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 USP11P51784 963 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
NEDD9-208ENST00000504387 CDK17Q00537 523 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 FKBP3Q00688 224 aaKnown RBP8.26□□□□□ -1.09
NEDD9-208ENST00000504387 COASYQ13057 564 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 FAM182AQ5T1J6 154 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 KRT79Q5XKE5 535 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 NEK8Q86SG6 692 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 PRUNE1Q86TP1 453 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
NEDD9-208ENST00000504387 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 PNMA5Q96PV4 448 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 SETDB2Q96T68 719 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 C7orf25Q9BPX7 421 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 CEP72Q9P209 647 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF219Q9P2Y4 722 aaPredicted RBP8.26□□□□□ -1.09
NEDD9-208ENST00000504387 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 ECM29Q5VYK3 1845 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 PCNTO95613 3336 aa8.26□□□□□ -1.09
NEDD9-208ENST00000504387 G3V3G9 751 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 DNAJC8O75937 253 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 DDAH1O94760 285 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 CLSTN1O94985 981 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 LDHBP07195 334 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 H2AFZP0C0S5 128 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 SLURP2P0DP57 97 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RARAP10276 462 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 TNFRSF8P28908 595 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 HNRNPH3P31942 346 aaKnown RBP8.25□□□□□ -1.09
NEDD9-208ENST00000504387 CASP4P49662 377 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 CASP5P51878 434 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 RAD23BP54727 409 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 KCNA1Q09470 495 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 DCAF8Q5TAQ9 597 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 ISLR2Q6UXK2 745 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 H2AFVQ71UI9 128 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 VSIG1Q86XK7 387 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 FITM2Q8N6M3 262 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 TPCN2Q8NHX9 752 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 NEK9Q8TD19 979 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 SCFD2Q8WU76 684 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 SPOCK2Q92563 424 aa8.25□□□□□ -1.09
NEDD9-208ENST00000504387 HOOK2Q96ED9 719 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms