RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 OR10A5Q9H207 317 aa8.25□□□□□ -1.09
UBE2D3-217ENST00000504211 USP36Q9P275 1121 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-217ENST00000504211 MCM8Q9UJA3 840 aa8.25□□□□□ -1.09
UBE2D3-217ENST00000504211 A0A1B0GTL3 188 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 UBA6A0AVT1 1052 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 GPR39O43194 453 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 LSP1P33241 339 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 IL13P35225 146 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 PTPROQ16827 1216 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 DPP8Q6V1X1 898 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 ADGRG2Q8IZP9 1017 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 CALML6Q8TD86 181 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 ERCC4Q92889 916 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 SLC5A5Q92911 643 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 GPATCH3Q96I76 525 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 MAML3Q96JK9 1138 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 YTHDC1Q96MU7 727 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 PCDH12Q9NPG4 1184 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 ATP8A1Q9Y2Q0 1164 aa8.24□□□□□ -1.09
UBE2D3-217ENST00000504211 ULK1O75385 1050 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 KLHL18O94889 574 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 ROM1Q03395 351 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 DDB1Q16531 1140 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 TTC38Q5R3I4 469 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 FAM26FQ5R3K3 315 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 TRMT10BQ6PF06 316 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 DDX42Q86XP3 938 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 PHYKPLQ8IUZ5 450 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 RTF1Q92541 710 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 KRTAP4-12Q9BQ66 201 aa8.23□□□□□ -1.09
UBE2D3-217ENST00000504211 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 SESN3P58005 492 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 VMACQ2NL98 169 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 KRTAP19-4Q3LI73 84 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 BROXQ5VW32 411 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 LHFPL2Q6ZUX7 228 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 C7orf31Q8N865 590 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 WDR66Q8TBY9 1149 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 ADAMTS17Q8TE56 1095 aa8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 LUC7LQ9NQ29 371 aaKnown RBP8.22□□□□□ -1.09
UBE2D3-217ENST00000504211 H0Y858 1186 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 DDX3XO00571 662 aaKnown RBP eCLIP8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 APEX1P27695 318 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 SLURP1P55000 103 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 SLC6A3Q01959 620 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 MYBPC3Q14896 1274 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 RNF219Q5W0B1 726 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 SLFN12LQ6IEE8 588 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 ZNF761Q86XN6 746 aaPredicted RBP8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 SPATS2Q86XZ4 545 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 SIAH1Q8IUQ4 282 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 CLRN3Q8NCR9 226 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 L2HGDHQ9H9P8 463 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
UBE2D3-217ENST00000504211 C9orf118A6NHY6 69 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 ZSCAN22P10073 491 aaPredicted RBP8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 RGS3P49796 1198 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 JAG1P78504 1218 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 KANSL1Q7Z3B3 1105 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 RASSF3Q86WH2 238 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 SP8Q8IXZ3 490 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 ZDHHC5Q9C0B5 715 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 MS4A5Q9H3V2 200 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 FTSJ1Q9UET6 329 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 PHLDB1Q86UU1 1377 aa8.2□□□□□ -1.1
UBE2D3-217ENST00000504211 TRIM13O60858 407 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 CDKN1CP49918 316 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 TMPRSS15P98073 1019 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 CD83Q01151 205 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 TMEM200BQ69YZ2 307 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 NECAB2Q7Z6G3 386 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 TXNDC5Q8NBS9 432 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 ZNF496Q96IT1 587 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 TUBGCP5Q96RT8 1024 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 POFUT1Q9H488 388 aa8.19□□□□□ -1.1
UBE2D3-217ENST00000504211 K7ESF4 209 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 CUTAO60888 179 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 CDK11BP21127 795 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 POLD1P28340 1107 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 NFATC3Q12968 1075 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 TOP3AQ13472 1001 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 MOGSQ13724 837 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 WDR72Q3MJ13 1102 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 PRAMEF9Q5VWM5 478 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 TIGD7Q6NT04 549 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 FRMD7Q6ZUT3 714 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 ESPNLQ6ZVH7 1005 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 HDGFL2Q7Z4V5 671 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 REXO1L1PQ8IX06 675 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 PRPF38AQ8NAV1 312 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 WDR48Q8TAF3 677 aa8.18□□□□□ -1.1
UBE2D3-217ENST00000504211 KATNBL1Q9H079 304 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms