RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 NACC1Q96RE7 527 aa14.88□□□□□ -0.03
PRDM2-213ENST00000503842 TNMDQ9H2S6 317 aa14.88□□□□□ -0.03
PRDM2-213ENST00000503842 ZNF302Q9NR11 478 aa14.88□□□□□ -0.03
PRDM2-213ENST00000503842 DNM3Q9UQ16 869 aa14.88□□□□□ -0.03
PRDM2-213ENST00000503842 EMSYQ7Z589 1322 aa14.88□□□□□ -0.03
PRDM2-213ENST00000503842 A0A087WWV3 80 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 A6NJR5 290 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 BACH1O14867 736 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 MMP3P08254 477 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 PLA2G4BP0C869 781 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 XRCC6P12956 609 aaKnown RBP eCLIP14.87□□□□□ -0.03
PRDM2-213ENST00000503842 ATP4AP20648 1035 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 CCND3P30281 292 aaPredicted RBP14.87□□□□□ -0.03
PRDM2-213ENST00000503842 CTCFP49711 727 aaPredicted RBP14.87□□□□□ -0.03
PRDM2-213ENST00000503842 NKX3-2P78367 333 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 CAMK4Q16566 473 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 FAM160B1Q5W0V3 765 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 CCDC34Q96HJ3 373 aa14.87□□□□□ -0.03
PRDM2-213ENST00000503842 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
PRDM2-213ENST00000503842 DBR1Q9UK59 544 aaKnown RBP14.87□□□□□ -0.03
PRDM2-213ENST00000503842 LOXHD1Q8IVV2 1947 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 ZBTB39O15060 712 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 PPFIA4O75335 1185 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 LGALS2P05162 132 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 AFMP43652 599 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 STAT5BP51692 787 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 SLC12A3P55017 1021 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 PRKCEQ02156 737 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 PNOCQ13519 176 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 POSTNQ15063 836 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 SV2BQ7L1I2 683 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 PLPPR4Q7Z2D5 763 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 CTU1Q7Z7A3 348 aaKnown RBP14.86□□□□□ -0.03
PRDM2-213ENST00000503842 TRIM50Q86XT4 487 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 SYT2Q8N9I0 419 aaPredicted RBP14.86□□□□□ -0.03
PRDM2-213ENST00000503842 PIGOQ8TEQ8 1089 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 STAMQ92783 540 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 C7orf25Q9BPX7 421 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 AP5M1Q9H0R1 490 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 ANKEF1Q9NU02 776 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 HOOK1Q9UJC3 728 aaKnown RBP14.86□□□□□ -0.03
PRDM2-213ENST00000503842 PCNTO95613 3336 aa14.86□□□□□ -0.03
PRDM2-213ENST00000503842 MYMKA6NI61 221 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 OATP04181 439 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 MYL1P05976 194 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 RARBP10826 455 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 CNGA1P29973 690 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 YWHABP31946 246 aaKnown RBP14.85□□□□□ -0.03
PRDM2-213ENST00000503842 LBX1P52954 281 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 GJA9P57773 515 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 DPYDQ12882 1025 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 ZSCAN23Q3MJ62 389 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 XKR3Q5GH77 459 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 VARS2Q5ST30 1063 aaKnown RBP14.85□□□□□ -0.03
PRDM2-213ENST00000503842 UTP14CQ5TAP6 766 aaKnown RBP14.85□□□□□ -0.03
PRDM2-213ENST00000503842 CNNM4Q6P4Q7 775 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 ANO5Q75V66 913 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 C16orf70Q9BSU1 422 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 TRIM9Q9C026 710 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 BHMT2Q9H2M3 363 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 SMARCAD1Q9H4L7 1026 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 AZI2Q9H6S1 392 aa14.85□□□□□ -0.03
PRDM2-213ENST00000503842 DDX20Q9UHI6 824 aaKnown RBP14.85□□□□□ -0.03
PRDM2-213ENST00000503842 CEP350Q5VT06 3117 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 ADAMTS4O75173 837 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 LETM1O95202 739 aaPredicted RBP14.84□□□□□ -0.03
PRDM2-213ENST00000503842 CYP11B2P19099 503 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 CASP1P29466 404 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 RARRES1P49788 294 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 CPT1AP50416 773 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 SLC26A2P50443 739 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 AMPD3Q01432 767 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 CUL4BQ13620 913 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 FSCN1Q16658 493 aaKnown RBP14.84□□□□□ -0.03
PRDM2-213ENST00000503842 DGKDQ16760 1214 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 LCE2DQ5TA82 110 aaPredicted RBP14.84□□□□□ -0.03
PRDM2-213ENST00000503842 GPBP1Q86WP2 473 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 SPATA20Q8TB22 786 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 ATP8B4Q8TF62 1192 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 ERCC4Q92889 916 aaPredicted RBP14.84□□□□□ -0.03
PRDM2-213ENST00000503842 GLG1Q92896 1179 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 FAM167AQ96KS9 214 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 NIFKQ9BYG3 293 aaKnown RBP14.84□□□□□ -0.03
PRDM2-213ENST00000503842 LRRC27Q9C0I9 530 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 KIAA1468Q9P260 1216 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 TUBE1Q9UJT0 475 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 SYNRGQ9UMZ2 1314 aa14.84□□□□□ -0.03
PRDM2-213ENST00000503842 ARHGEF35A5YM69 484 aa14.83□□□□□ -0.04
PRDM2-213ENST00000503842 TMEM150BA6NC51 233 aa14.83□□□□□ -0.04
PRDM2-213ENST00000503842 MYADML2A6NDP7 307 aa14.83□□□□□ -0.04
PRDM2-213ENST00000503842 SSBP05455 408 aaKnown RBP eCLIP14.83□□□□□ -0.04
PRDM2-213ENST00000503842 ZNF286BP0CG31 522 aa14.83□□□□□ -0.04
PRDM2-213ENST00000503842 SARSP49591 514 aaKnown RBP14.83□□□□□ -0.04
PRDM2-213ENST00000503842 DHX8Q14562 1220 aaKnown RBP14.83□□□□□ -0.04
PRDM2-213ENST00000503842 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
PRDM2-213ENST00000503842 BRDTQ58F21 947 aaPredicted RBP14.83□□□□□ -0.04
PRDM2-213ENST00000503842 ARSHQ5FYA8 562 aa14.83□□□□□ -0.04
PRDM2-213ENST00000503842 NT5DC1Q5TFE4 455 aa14.83□□□□□ -0.04
PRDM2-213ENST00000503842 PLA2G4FQ68DD2 849 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms