RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 BPIFB4P59827 614 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 TMED8Q6PL24 325 aaPredicted RBP18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 FAM47EQ6ZV65 393 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 TRPM8Q7Z2W7 1104 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 ARHGAP18Q8N392 663 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 ARL8AQ96BM9 186 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 TGS1Q96RS0 853 aaKnown RBP18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 PIGSQ96S52 555 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 SUDS3Q9H7L9 328 aaPredicted RBP18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 USP40Q9NVE5 1235 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 CLIC2O15247 247 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 CHN1P15882 459 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 RCN2Q14257 317 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 ODR4Q5SWX8 454 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 FGFR1OP2Q9NVK5 253 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 C1orf167Q5SNV9 1468 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 DPH6Q7L8W6 267 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 NOD2Q9HC29 1040 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 TMOD1P28289 359 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 HSPA9P38646 679 aaKnown RBP18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 CYP4A11Q02928 519 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 SLC30A9Q6PML9 568 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 TEX9Q8N6V9 391 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 GSDMBQ8TAX9 411 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 NUDCD1Q96RS6 583 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 BACH1O14867 736 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 GYG2O15488 501 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 SPATA21Q7Z572 469 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 TRIM9Q9C026 710 aa18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 USP15Q9Y4E8 981 aaPredicted RBP18.54■□□□□ 0.56
HMGXB3-201ENST00000502717 PP2D1A8MPX8 630 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 RASA4BC9J798 803 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 RASA4O43374 803 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 SCARF1Q14162 830 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 CDKAL1Q5VV42 579 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 EPM2AIP1Q7L775 607 aaPredicted RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 SYT2Q8N9I0 419 aaPredicted RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 RAD54LQ92698 747 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 PPLO60437 1756 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 RAD51CO43502 376 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 GRIN1Q05586 938 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 CFBP00751 764 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 PRKG1Q13976 671 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 GIMAP8Q8ND71 665 aaPredicted RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 NT5C1BQ96P26 610 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 SMARCAL1Q9NZC9 954 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 FCER1AP12319 257 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 PTK2Q05397 1052 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 HADHQ16836 314 aaKnown RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 GPATCH4Q5T3I0 446 aaKnown RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 SRRM1Q8IYB3 904 aaKnown RBP18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 ERGIC2Q96RQ1 377 aa18.53■□□□□ 0.56
HMGXB3-201ENST00000502717 FAM205CA6NFA0 338 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 TRIM55Q9BYV6 548 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 ZFP69BQ9UJL9 534 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 MT-ND3P03897 115 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 DBN1Q16643 649 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 CAVIN3Q969G5 261 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 CCDC97Q96F63 343 aaPredicted RBP18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 PRMT1Q99873 361 aaKnown RBP18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 TNNI1P19237 187 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 KAZNQ674X7 775 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 AFAP1L2Q8N4X5 818 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 OR2W6PQ8NHA6 318 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 UBE2TQ9NPD8 197 aaPredicted RBP18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 KCNG1Q9UIX4 513 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 PCDHA1Q9Y5I3 950 aa18.52■□□□□ 0.56
HMGXB3-201ENST00000502717 ATP2B4P23634 1241 aa18.52■□□□□ 0.55
HMGXB3-201ENST00000502717 ANXA13P27216 316 aa18.52■□□□□ 0.55
HMGXB3-201ENST00000502717 USP38Q8NB14 1042 aa18.52■□□□□ 0.55
HMGXB3-201ENST00000502717 DIP2BQ9P265 1576 aa18.52■□□□□ 0.55
HMGXB3-201ENST00000502717 MROH2AA6NES4 1674 aa18.52■□□□□ 0.55
HMGXB3-201ENST00000502717 DDX39AO00148 427 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 STK10O94804 968 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 PSMD6Q15008 389 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 LRRC14Q15048 493 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 TRIP13Q15645 432 aaPredicted RBP18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 TAF12Q16514 161 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 DIP2AQ14689 1571 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 COASYQ13057 564 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 PNPLA7Q6ZV29 1317 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 CD44P16070 742 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 RFX5P48382 616 aaPredicted RBP18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 NME8Q8N427 588 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 PNMA2Q9UL42 364 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 ENO4A6NNW6 628 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 GGPS1O95749 300 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 NAB2Q15742 525 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 DMGDHQ9UI17 866 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-201ENST00000502717 TFR2Q9UP52 801 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms