RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 PLCG1P19174 1290 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 CDC25AP30304 524 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 ZNF76P36508 570 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 STAT3P40763 770 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 PSMA6P60900 246 aaKnown RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 RPS6P62753 249 aaKnown RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 RELBQ01201 579 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 SNAPC2Q13487 334 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 MORC3Q14149 939 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 DPCR1Q3MIW9 517 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 TMEM119Q4V9L6 283 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 KRT79Q5XKE5 535 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 MAP1SQ66K74 1059 aaPredicted RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 SNRNP48Q6IEG0 339 aaKnown RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 CNNM4Q6P4Q7 775 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 RNF207Q6ZRF8 634 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 C11orf57Q6ZUT1 292 aaPredicted RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 MLKLQ8NB16 471 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 GTF3C2Q8WUA4 911 aaPredicted RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 ERCC4Q92889 916 aaPredicted RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 SLC5A5Q92911 643 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 OPTNQ96CV9 577 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 PDLIM2Q96JY6 352 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 PPP1R9BQ96SB3 815 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 GTPBP4Q9BZE4 634 aaKnown RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 NT5C3AQ9H0P0 336 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 ACAD9Q9H845 621 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.58□□□□□ -1.042e-8■■■■■ 53.1
CDC42-205ENST00000498236 RNF146Q9NTX7 359 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 COL20A1Q9P218 1284 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 NXF1Q9UBU9 619 aaKnown RBP8.58□□□□□ -1.04
CDC42-205ENST00000498236 FBXO40Q9UH90 709 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 MAN1B1Q9UKM7 699 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 SLC45A1Q9Y2W3 748 aa8.58□□□□□ -1.04
CDC42-205ENST00000498236 MEN1O00255 615 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 TRAF5O00463 557 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 IKBKBO14920 756 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 PSMD10O75832 226 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 BMP6P22004 513 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 MUTP22033 750 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 COPB2P35606 906 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 AMPD3Q01432 767 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 CENPCQ03188 943 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 CCDC173Q0VFZ6 552 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 GRB10Q13322 594 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 PPP2R5CQ13362 524 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 TBCELQ5QJ74 424 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 HAUS3Q68CZ6 603 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 B3GNT9Q6UX72 402 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 GADL1Q6ZQY3 521 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 PLA2G4DQ86XP0 818 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 RIOX2Q8IUF8 465 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 DHX40Q8IX18 779 aaKnown RBP8.57□□□□□ -1.04
CDC42-205ENST00000498236 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 RASSF8Q8NHQ8 419 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 ERMNQ8TAM6 284 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 CYP2W1Q8TAV3 490 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 LRRC15Q8TF66 581 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 RIT2Q99578 217 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 C7orf25Q9BPX7 421 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 MXRA8Q9BRK3 442 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 LRRC27Q9C0I9 530 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 ASCC2Q9H1I8 757 aaPredicted RBP8.57□□□□□ -1.04
CDC42-205ENST00000498236 GBA2Q9HCG7 927 aaPredicted RBP8.57□□□□□ -1.04
CDC42-205ENST00000498236 PXMP2Q9NR77 195 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 RMND1Q9NWS8 449 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 VAV3Q9UKW4 847 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 RIPK3Q9Y572 518 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 UBIAD1Q9Y5Z9 338 aa8.57□□□□□ -1.04
CDC42-205ENST00000498236 COL11A1P12107 1806 aaPredicted RBP8.57□□□□□ -1.04
CDC42-205ENST00000498236 SMTNL1A8MU46 457 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 BIN1O00499 593 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 MAFGO15525 162 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 ICMTO60725 284 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 STAM2O75886 525 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 ZBTB48P10074 688 aaPredicted RBP8.56□□□□□ -1.04
CDC42-205ENST00000498236 ITGB5P18084 799 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 RPA1P27694 616 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 ERCC5P28715 1186 aaPredicted RBP8.56□□□□□ -1.04
CDC42-205ENST00000498236 AFMP43652 599 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 HERVK_113P62684 666 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 IRX3P78415 501 aaPredicted RBP8.56□□□□□ -1.04
CDC42-205ENST00000498236 ZNF211Q13398 564 aaPredicted RBP8.56□□□□□ -1.04
CDC42-205ENST00000498236 BAATQ14032 418 aaPredicted RBP8.56□□□□□ -1.04
CDC42-205ENST00000498236 KCNB1Q14721 858 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 PGM5Q15124 567 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 GPAT2Q6NUI2 795 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 SARM1Q6SZW1 724 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 SLC30A10Q6XR72 485 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 OTOP1Q7RTM1 612 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 LUZP1Q86V48 1076 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 GRAMD1CQ8IYS0 662 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 C2orf69Q8N8R5 385 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 NSUN6Q8TEA1 469 aaKnown RBP8.56□□□□□ -1.04
CDC42-205ENST00000498236 SNX29Q8TEQ0 813 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 LARP4BQ92615 738 aaKnown RBP8.56□□□□□ -1.04
CDC42-205ENST00000498236 CDK5RAP3Q96JB5 506 aa8.56□□□□□ -1.04
CDC42-205ENST00000498236 PNMA5Q96PV4 448 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms