RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MTERF2Q49AM1 385 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 FAM26DQ5JW98 314 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 TMEM240Q5SV17 173 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 C9orf50Q5SZB4 431 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 DEFB128Q7Z7B8 93 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 RSPH3Q86UC2 560 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 CATSPER3Q86XQ3 398 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 POLR3CQ9BUI4 534 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 FTOQ9C0B1 505 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 FAM49AQ9H0Q0 323 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-208ENST00000494334 LRWD1Q9UFC0 647 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 CLIC4Q9Y696 253 aa15.17■□□□□ 0.02
COL1A1-208ENST00000494334 NBNO60934 754 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 PARNO95453 639 aaKnown RBP15.16■□□□□ 0.02
COL1A1-208ENST00000494334 BMP15O95972 392 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 CHRNA1P02708 482 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 RPA1P27694 616 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 NPEPPSP55786 919 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 MGAT3Q09327 533 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 MBTPS1Q14703 1052 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 PTPAQ15257 358 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 SHHQ15465 462 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 ARL6IP4Q66PJ3 421 aaKnown RBP15.16■□□□□ 0.02
COL1A1-208ENST00000494334 PLA2G4FQ68DD2 849 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 ZNF365Q70YC5 407 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 OTUD6AQ7L8S5 288 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 KIAA0319LQ8IZA0 1049 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 TDHQ8IZJ6 230 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 NME8Q8N427 588 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 LINC01465Q8N7H1 131 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
COL1A1-208ENST00000494334 ERMNQ8TAM6 284 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 OSBPL7Q9BZF2 842 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 RAB34Q9BZG1 259 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 TUFT1Q9NNX1 390 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 CYP26B1Q9NR63 512 aa15.16■□□□□ 0.02
COL1A1-208ENST00000494334 A0A087WWV3 80 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 IGKV6-21A0A0C4DH24 114 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 VWA3AA6NCI4 1184 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 F13A1P00488 732 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 FGBP02675 491 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 CXCL10P02778 98 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 RPLP2P05387 115 aaKnown RBP15.15■□□□□ 0.02
COL1A1-208ENST00000494334 PFKMP08237 780 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 CDC25AP30304 524 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
COL1A1-208ENST00000494334 TBC1D8BQ0IIM8 1120 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 ECM1Q16610 540 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 EFCAB12Q6NXP0 572 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 PSRC1Q6PGN9 363 aaPredicted RBP15.15■□□□□ 0.02
COL1A1-208ENST00000494334 LRRC71Q8N4P6 559 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 METTL13Q8N6R0 699 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 CEP170P1Q96L14 293 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 KAT6AQ92794 2004 aa15.15■□□□□ 0.02
COL1A1-208ENST00000494334 MYH9P35579 1960 aaKnown RBP15.15■□□□□ 0.02
COL1A1-208ENST00000494334 A0A1W2PPC1 479 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 PP2D1A8MPX8 630 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 MAFO75444 373 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-208ENST00000494334 BRD1O95696 1058 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 XRCC6P12956 609 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL1A1-208ENST00000494334 CCT6AP40227 531 aaKnown RBP15.14■□□□□ 0.01
COL1A1-208ENST00000494334 CLCN3P51790 818 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 MRPS6P82932 125 aaKnown RBP15.14■□□□□ 0.01
COL1A1-208ENST00000494334 TMEM62Q0P6H9 643 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-208ENST00000494334 IER5Q5VY09 327 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 KRT79Q5XKE5 535 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 HAUS3Q68CZ6 603 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 SNX29Q8TEQ0 813 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 PIGOQ8TEQ8 1089 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 MMTAG2Q9BU76 263 aaKnown RBP15.14■□□□□ 0.01
COL1A1-208ENST00000494334 SUGCTQ9HAC7 445 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 ANKEF1Q9NU02 776 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 ZDHHC9Q9Y397 364 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 STK24Q9Y6E0 443 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 CDY2AQ9Y6F7 541 aa15.14■□□□□ 0.01
COL1A1-208ENST00000494334 MUTP22033 750 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 TMOD1P28289 359 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 RARRES1P49788 294 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 GRIN1Q05586 938 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 DRP2Q13474 957 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 XKR9Q5GH70 373 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 POTEGQ6S5H5 508 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 OTOP2Q7RTS6 562 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 NACC1Q96RE7 527 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 CELF4Q9BZC1 486 aaKnown RBP15.13■□□□□ 0.01
COL1A1-208ENST00000494334 DHX33Q9H6R0 707 aaKnown RBP15.13■□□□□ 0.01
COL1A1-208ENST00000494334 PPME1Q9Y570 386 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 TRPV2Q9Y5S1 764 aa15.13■□□□□ 0.01
COL1A1-208ENST00000494334 WDR81Q562E7 1941 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 M0QZ92 97 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 VTNP04004 478 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 MARCKSP29966 332 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-208ENST00000494334 NASPP49321 788 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-208ENST00000494334 SLC39A14Q15043 492 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms