RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 IRS2Q9Y4H2 1338 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 ETV2O00321 342 aaPredicted RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 ALDH1L1O75891 902 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 PRPF6O94906 941 aaKnown RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 FBLN1P23142 703 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 IARSP41252 1262 aaKnown RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 RGS3P49796 1198 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 PTPN21Q16825 1174 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 MCTP1Q6DN14 999 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 SLFN12LQ6IEE8 588 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 CCDC62Q6P9F0 684 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 LRSAM1Q6UWE0 723 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 TTLL7Q6ZT98 887 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 RTN4RL1Q86UN2 441 aaPredicted RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 PNMA8AQ86V59 439 aaPredicted RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 IGDCC3Q8IVU1 814 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 RPGRQ92834 1020 aaKnown RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 ZNF496Q96IT1 587 aaPredicted RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 MAML3Q96JK9 1138 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 SLC38A3Q99624 504 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 GORASP1Q9BQQ3 440 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 ASPSCR1Q9BZE9 553 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 METTL14Q9HCE5 456 aaKnown RBP5.32□□□□□ -1.56
CLK1-213ENST00000492793 PCDH18Q9HCL0 1135 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 AASDHPPTQ9NRN7 309 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 MKS1Q9NXB0 559 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 GALNT8Q9NY28 637 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 BTBD7Q9P203 1132 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 ZFP69BQ9UJL9 534 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 PMF1-BGLAPU3KQ54 211 aa5.32□□□□□ -1.56
CLK1-213ENST00000492793 TCAF2A6NFQ2 919 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 NFIBO00712 420 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 FARP2O94887 1054 aaPredicted RBP5.31□□□□□ -1.56
CLK1-213ENST00000492793 PRLP01236 227 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 ECE1P42892 770 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 ITGA1P56199 1179 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 ALDH6A1Q02252 535 aaKnown RBP5.31□□□□□ -1.56
CLK1-213ENST00000492793 ADCY2Q08462 1091 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 KLF1Q13351 362 aaPredicted RBP5.31□□□□□ -1.56
CLK1-213ENST00000492793 WDR72Q3MJ13 1102 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 CT83Q5H943 113 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 PROSER1Q86XN7 944 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 STPG3Q8N7X2 389 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 FOXRED1Q96CU9 486 aaPredicted RBP5.31□□□□□ -1.56
CLK1-213ENST00000492793 SIGLEC10Q96LC7 697 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 NOX5Q96PH1 765 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 C11orf84Q9BUA3 381 aaPredicted RBP5.31□□□□□ -1.56
CLK1-213ENST00000492793 SEMA4AQ9H3S1 761 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 GCM1Q9NP62 436 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 USP36Q9P275 1121 aaKnown RBP5.31□□□□□ -1.56
CLK1-213ENST00000492793 TCEAL9Q9UHQ7 104 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 CNOT6Q9ULM6 557 aaKnown RBP5.31□□□□□ -1.56
CLK1-213ENST00000492793 EDARQ9UNE0 448 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 WASF3Q9UPY6 502 aa5.31□□□□□ -1.56
CLK1-213ENST00000492793 GABRDO14764 452 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
CLK1-213ENST00000492793 PCDH8O95206 1070 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 NEK2P51955 445 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 ACAP2Q15057 778 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 PDCD1Q15116 288 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 TTF1Q15361 905 aaPredicted RBP5.3□□□□□ -1.56
CLK1-213ENST00000492793 CNKSR3Q6P9H4 555 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 DPP8Q6V1X1 898 aaPredicted RBP5.3□□□□□ -1.56
CLK1-213ENST00000492793 ATG14Q6ZNE5 492 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 CXorf67Q86X51 503 aaPredicted RBP5.3□□□□□ -1.56
CLK1-213ENST00000492793 TTLL6Q8N841 843 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 DTX3Q8N9I9 347 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 KYQ8NBH2 561 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 FAM84AQ96KN4 292 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 ACAP3Q96P50 834 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 WRNIP1Q96S55 665 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 FOXB1Q99853 325 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 MENTQ9BUN1 341 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 AMNQ9BXJ7 453 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 QRSL1Q9H0R6 528 aaKnown RBP5.3□□□□□ -1.56
CLK1-213ENST00000492793 HSPBP1Q9NZL4 362 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 RNF114Q9Y508 228 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 MRFAP1Q9Y605 127 aa5.3□□□□□ -1.56
CLK1-213ENST00000492793 SHTN1A0MZ66 631 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 MAFGO15525 162 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 H2AFYO75367 372 aaKnown RBP5.29□□□□□ -1.56
CLK1-213ENST00000492793 CYP7B1O75881 506 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 CFBP00751 764 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 LPLP06858 475 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 CT47B1P0C2W7 299 aaPredicted RBP5.29□□□□□ -1.56
CLK1-213ENST00000492793 PI3P19957 117 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 APEX1P27695 318 aaKnown RBP5.29□□□□□ -1.56
CLK1-213ENST00000492793 ADCY8P40145 1251 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 ERVK-21P61565 698 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 ADAM9Q13443 819 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 MYBPC3Q14896 1274 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 NOLC1Q14978 699 aaKnown RBP eCLIP5.29□□□□□ -1.56
CLK1-213ENST00000492793 UGT8Q16880 541 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 TRMT10BQ6PF06 316 aaKnown RBP5.29□□□□□ -1.56
CLK1-213ENST00000492793 OTOP2Q7RTS6 562 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 EAF2Q96CJ1 260 aaPredicted RBP5.29□□□□□ -1.56
CLK1-213ENST00000492793 PWWP2AQ96N64 755 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 BTBD2Q9BX70 525 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 OR10A5Q9H207 317 aa5.29□□□□□ -1.56
CLK1-213ENST00000492793 DNAJC28Q9NX36 388 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms