RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 COLQQ9Y215 455 aaPredicted RBP12.41□□□□□ -0.42
CPSF7-212ENST00000489728 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
CPSF7-212ENST00000489728 KDM3AQ9Y4C1 1321 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 POTEMA6NI47 508 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 M0QZ92 97 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 BAIAP3O94812 1187 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 SLITRK3O94933 977 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 ACTN1P12814 892 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
CPSF7-212ENST00000489728 RFC5P40937 340 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 TECP42680 631 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 CDC42EP1Q00587 391 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 TBC1D8BQ0IIM8 1120 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 RUFY4Q6ZNE9 571 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 ANO5Q75V66 913 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 FERMT3Q86UX7 667 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 USP38Q8NB14 1042 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 SCLYQ96I15 445 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 DYDC2Q96IM9 177 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 AK8Q96MA6 479 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 ANKEF1Q9NU02 776 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 LRWD1Q9UFC0 647 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 MYH15Q9Y2K3 1946 aa12.4□□□□□ -0.42
CPSF7-212ENST00000489728 ARID2Q68CP9 1835 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 IGKV6-21A0A0C4DH24 114 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 DDX11L8A8MPP1 907 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 EFCAB14O75071 495 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 FGBP02675 491 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 ZSCAN22P10073 491 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-212ENST00000489728 MRPS6P82932 125 aaKnown RBP12.39□□□□□ -0.43
CPSF7-212ENST00000489728 CYP4A11Q02928 519 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 MGAT3Q09327 533 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 LRIT3Q3SXY7 679 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 ATL3Q6DD88 541 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 TPH2Q8IWU9 490 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 LINC01465Q8N7H1 131 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 TRAPPC12Q8WVT3 735 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 DNAJB3Q8WWF6 145 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 SLC7A3Q8WY07 619 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 HERVK_113Q902F9 699 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 NACC1Q96RE7 527 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 CEP89Q96ST8 783 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 CYP26B1Q9NR63 512 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 RGL1Q9NZL6 768 aa12.39□□□□□ -0.43
CPSF7-212ENST00000489728 WRAP73Q9P2S5 460 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-212ENST00000489728 MAFO75444 373 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-212ENST00000489728 SPATA31C1P0DKV0 1188 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 LONP1P36776 959 aaKnown RBP12.38□□□□□ -0.43
CPSF7-212ENST00000489728 DNM2P50570 870 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 EPHB4P54760 987 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 CTTNQ14247 550 aaKnown RBP12.38□□□□□ -0.43
CPSF7-212ENST00000489728 MBTPS1Q14703 1052 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 SF3A1Q15459 793 aaKnown RBP12.38□□□□□ -0.43
CPSF7-212ENST00000489728 MTERF2Q49AM1 385 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 ODR4Q5SWX8 454 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 KRT79Q5XKE5 535 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 CNKSR3Q6P9H4 555 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 C16orf59Q7L2K0 433 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 KIAA0319LQ8IZA0 1049 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 APBB2Q92870 758 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 VWCEQ96DN2 955 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 CEP170P1Q96L14 293 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 ZNF396Q96N95 335 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-212ENST00000489728 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.431e-9■■■■□ 25.6
CPSF7-212ENST00000489728 DHX33Q9H6R0 707 aaKnown RBP12.38□□□□□ -0.43
CPSF7-212ENST00000489728 DBR1Q9UK59 544 aaKnown RBP12.38□□□□□ -0.43
CPSF7-212ENST00000489728 TRPV2Q9Y5S1 764 aa12.38□□□□□ -0.43
CPSF7-212ENST00000489728 SIP14410 1827 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 SCN5AQ14524 2016 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 ABHD14A-ACY1A0A1B0GW23 586 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 NBNO60934 754 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 F13A1P00488 732 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 CHRNA1P02708 482 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-212ENST00000489728 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-212ENST00000489728 GPNMBQ14956 572 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 SHHQ15465 462 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 PLEKHG4Q58EX7 1191 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 HYIQ5T013 277 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 EFCAB12Q6NXP0 572 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 TSHZ1Q6ZSZ6 1077 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 ZNF365Q70YC5 407 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 SNX29Q8TEQ0 813 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 SEPT8Q92599 483 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 RNPC3Q96LT9 517 aaKnown RBP12.37□□□□□ -0.43
CPSF7-212ENST00000489728 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
CPSF7-212ENST00000489728 CELF4Q9BZC1 486 aaKnown RBP12.37□□□□□ -0.43
CPSF7-212ENST00000489728 NT5C3AQ9H0P0 336 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 FAM49AQ9H0Q0 323 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-212ENST00000489728 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
CPSF7-212ENST00000489728 VWA3AA6NCI4 1184 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 MED24O75448 989 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 DGAT1O75907 488 aa12.36□□□□□ -0.43
CPSF7-212ENST00000489728 YEATS4O95619 227 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms