RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 BCCIPQ9P287 314 aaKnown RBP eCLIP6.56□□□□□ -1.36
COPA-203ENST00000481040 STOML1Q9UBI4 398 aa6.56□□□□□ -1.36
COPA-203ENST00000481040 FBXO9Q9UK97 447 aaPredicted RBP6.56□□□□□ -1.36
COPA-203ENST00000481040 EDARQ9UNE0 448 aa6.56□□□□□ -1.36
COPA-203ENST00000481040 GTF2A1LQ9UNN4 478 aa6.56□□□□□ -1.36
COPA-203ENST00000481040 CLEC2LP0C7M8 214 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 TMEM253P0C7T8 217 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 SARSP49591 514 aaKnown RBP6.55□□□□□ -1.36
COPA-203ENST00000481040 SLC9A5Q14940 896 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 EPHA7Q15375 998 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 MAPRE1Q15691 268 aaKnown RBP6.55□□□□□ -1.36
COPA-203ENST00000481040 UGT8Q16880 541 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.55□□□□□ -1.36
COPA-203ENST00000481040 CDKAL1Q5VV42 579 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 CCDC70Q6NSX1 233 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 ZPBP2Q6X784 338 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 MYLK4Q86YV6 388 aaPredicted RBP6.55□□□□□ -1.36
COPA-203ENST00000481040 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 SIRT2Q8IXJ6 389 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 KIAA0319LQ8IZA0 1049 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 PRR18Q8N4B5 295 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 TMEM52Q8NDY8 209 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 PIP4K2CQ8TBX8 421 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 GATA6Q92908 595 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 COA7Q96BR5 231 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 C16orf92Q96LL3 132 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 TBCBQ99426 244 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 BHMT2Q9H2M3 363 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 KCNH7Q9NS40 1196 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 MARCH2Q9P0N8 246 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 DSEQ9UL01 958 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 X6R8D5 127 aa6.55□□□□□ -1.36
COPA-203ENST00000481040 TMEM82A0PJX8 343 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 PRR19A6NJB7 356 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 KIAA1324LA8MWY0 1029 aaPredicted RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 DHX15O43143 795 aaKnown RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 B3GALT2O43825 422 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 DGKIO75912 1065 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 UBXN7O94888 489 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 BDNFP23560 247 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 MANFP55145 182 aaKnown RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 MRPS9P82933 396 aaKnown RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 ALDH6A1Q02252 535 aaKnown RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 IFIT5Q13325 482 aaKnown RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 SEC23AQ15436 765 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 GAB4Q2WGN9 574 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 TEX2Q8IWB9 1127 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 NLGN4XQ8N0W4 816 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 THEMISQ8N1K5 641 aaPredicted RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 PPM1NQ8N819 430 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 TEX19Q8NA77 164 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 CD244Q9BZW8 370 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 SEMA4AQ9H3S1 761 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 ERVK13-1Q9NX77 482 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 GULP1Q9UBP9 304 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 ZNF69Q9UC07 566 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 POLHQ9Y253 713 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 COA3Q9Y2R0 106 aaPredicted RBP6.54□□□□□ -1.36
COPA-203ENST00000481040 ATP23Q9Y6H3 246 aa6.54□□□□□ -1.36
COPA-203ENST00000481040 C22orf46C9J442 243 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 GOLIM4O00461 696 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 DTNBO60941 627 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 MTHFD2P13995 350 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 FNTBP49356 437 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 SLC5A3P53794 718 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 NFIAQ12857 509 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 BIRC3Q13489 604 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 PGS1Q32NB8 556 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 CYP27C1Q4G0S4 372 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 HSF5Q4G112 596 aaPredicted RBP6.53□□□□□ -1.36
COPA-203ENST00000481040 RNF220Q5VTB9 566 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 DUSP27Q5VZP5 1158 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 HLA-DQA1Q5Y7H0 255 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 ESPNLQ6ZVH7 1005 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 PCGF5Q86SE9 256 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 NKAPQ8N5F7 415 aaKnown RBP6.53□□□□□ -1.36
COPA-203ENST00000481040 UHMK1Q8TAS1 419 aaKnown RBP6.53□□□□□ -1.36
COPA-203ENST00000481040 DEPTORQ8TB45 409 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 APOL5Q9BWW9 433 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 B3GNT5Q9BYG0 378 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 SLC6A20Q9NP91 592 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 MAP3K20Q9NYL2 800 aaKnown RBP6.53□□□□□ -1.36
COPA-203ENST00000481040 RTEL1Q9NZ71 1219 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 SWAP70Q9UH65 585 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 DUSP13Q9UII6 198 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 L1RE1Q9UN81 338 aa6.53□□□□□ -1.36
COPA-203ENST00000481040 RASA4BC9J798 803 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 RASA4O43374 803 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 PPP1R11O60927 126 aaPredicted RBP6.52□□□□□ -1.37
COPA-203ENST00000481040 LTKP29376 864 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 SDHAP31040 664 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 ADMP35318 185 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 BTKQ06187 659 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 TRIM14Q14142 442 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 CATSPEREQ5SY80 951 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
COPA-203ENST00000481040 RNF43Q68DV7 783 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms