RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NELL2Q99435 816 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 USP44Q9H0E7 712 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 RNPEPQ9H4A4 650 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 GPCPD1Q9NPB8 672 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 VPS45Q9NRW7 570 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 DOPEY2Q9Y3R5 2298 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 ATMQ13315 3056 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 CLUHO75153 1309 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 TMEM232C9JQI7 657 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 ANHXE9PGG2 379 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 LAMP2P13473 410 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 HOXC8P31273 242 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 CD52P31358 61 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 ZAP70P43403 619 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 STAT2P52630 851 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 C15orf39Q6ZRI6 1047 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 LONP2Q86WA8 852 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 PPTC7Q8NI37 304 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 PIP4K2CQ8TBX8 421 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 SLC22A17Q8WUG5 538 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 AUTS2Q8WXX7 1259 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 LOXL4Q96JB6 756 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 RIOK1Q9BRS2 568 aaKnown RBP7.85□□□□□ -1.15
HDAC3-206ENST00000471968 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
HDAC3-206ENST00000471968 CHRDQ9H2X0 955 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 CWH43Q9H720 699 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 AGO3Q9H9G7 860 aaKnown RBP7.85□□□□□ -1.15
HDAC3-206ENST00000471968 WDR6Q9NNW5 1121 aaKnown RBP7.85□□□□□ -1.15
HDAC3-206ENST00000471968 DDX41Q9UJV9 622 aaKnown RBP7.85□□□□□ -1.15
HDAC3-206ENST00000471968 CCPG1Q9ULG6 757 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 PAXBP1Q9Y5B6 917 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 SUPT16HQ9Y5B9 1047 aaKnown RBP7.85□□□□□ -1.15
HDAC3-206ENST00000471968 PCDHB7Q9Y5E2 793 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 CACNA1EQ15878 2313 aa7.85□□□□□ -1.15
HDAC3-206ENST00000471968 CYP2D7A0A087X1C5 515 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 H0Y626 953 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 NFIBO00712 420 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 SORBS3O60504 671 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 TRIM16O95361 564 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 RDXP35241 583 aaKnown RBP7.84□□□□□ -1.15
HDAC3-206ENST00000471968 PPM1AP35813 382 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 CXCL12P48061 93 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 UAP1L1Q3KQV9 507 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 FBXO47Q5MNV8 452 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 TTC39AQ5SRH9 613 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 FAM102BQ5T8I3 360 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 KCNT2Q6UVM3 1135 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 ZNF852Q6ZMS4 543 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 TSHZ1Q6ZSZ6 1077 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 GET4Q7L5D6 327 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-206ENST00000471968 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDAC3-206ENST00000471968 CHMP4CQ96CF2 233 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 FTHL17Q9BXU8 183 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 CRNKL1Q9BZJ0 848 aaKnown RBP7.84□□□□□ -1.15
HDAC3-206ENST00000471968 CCDC8Q9H0W5 538 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-206ENST00000471968 DCP1AQ9NPI6 582 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-206ENST00000471968 COPRSQ9NQ92 184 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 SETD4Q9NVD3 440 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 CLIP2Q9UDT6 1046 aa7.84□□□□□ -1.15
HDAC3-206ENST00000471968 NDRG2Q9UN36 371 aaKnown RBP7.84□□□□□ -1.15
HDAC3-206ENST00000471968 MYH8P13535 1937 aa7.84□□□□□ -1.16
HDAC3-206ENST00000471968 C2orf16Q68DN1 1984 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 MAGEB6P1A0A0J9YX57 407 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 LNP1A1A4G5 178 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 GNAT1P11488 350 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 BMP3P12645 472 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 ABCG1P45844 678 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 RAP1GAPP47736 663 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 MGAT3Q09327 533 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 LAMC2Q13753 1193 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 BMS1Q14692 1282 aaKnown RBP7.83□□□□□ -1.16
HDAC3-206ENST00000471968 WTAPQ15007 396 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 MAMSTRQ6ZN01 415 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 KBTBD6Q86V97 674 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 RPAP2Q8IXW5 612 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-206ENST00000471968 FGF14Q92915 247 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 EMID1Q96A84 441 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-206ENST00000471968 ZNF558Q96NG5 402 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 ARID3AQ99856 593 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 C16orf70Q9BSU1 422 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 SLC32A1Q9H598 525 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 TMEM9BQ9NQ34 198 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 NYAP2Q9P242 653 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 MRPS17Q9Y2R5 130 aaKnown RBP7.83□□□□□ -1.16
HDAC3-206ENST00000471968 PCDHGA5Q9Y5G8 931 aa7.83□□□□□ -1.16
HDAC3-206ENST00000471968 A0A087WV48 116 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 H3BRB1 525 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 IGSF3O75054 1194 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 PPFIA4O75335 1185 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 MAFO75444 373 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-206ENST00000471968 GP1BBP13224 206 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 CSRP3P50461 194 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 ARHGAP4P98171 946 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 PFKPQ01813 784 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 C4orf17Q53FE4 359 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 PARM1Q6UWI2 310 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 RNF207Q6ZRF8 634 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 C16orf86Q6ZW13 317 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 CACNA2D4Q7Z3S7 1137 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 CHURC1Q8WUH1 139 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms