RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SLC8A3P57103 927 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 CDCA2Q69YH5 1023 aaPredicted RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 FAM133AQ8N9E0 248 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 FAM84AQ96KN4 292 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 ZNF70Q9UC06 446 aaPredicted RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 HYOU1Q9Y4L1 999 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 NCK2O43639 380 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 ABCB4P21439 1286 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 CYLC1P35663 651 aaPredicted RBP13.44□□□□□ -0.26
USP11-206ENST00000469080 DYDC2Q96IM9 177 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 PNMA5Q96PV4 448 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 EPAS1Q99814 870 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 NDST4Q9H3R1 872 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 EMILIN3Q9NT22 766 aa13.44□□□□□ -0.26
USP11-206ENST00000469080 LRRN2O75325 713 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 UPP2O95045 317 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 EIF4A3P38919 411 aaKnown RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 FAM114A1Q8IWE2 563 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 CCDC13Q8IYE1 715 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 CCDC127Q96BQ5 260 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 FAM86B1E9PN63 330 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 EPHB6O15197 1021 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 SMIM24O75264 130 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 NDUFA10O95299 355 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 MOCS3O95396 460 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 SYF2O95926 243 aaKnown RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 FAM86B2P0C5J1 330 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 MAGEA1P43355 309 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 GALNT17Q6IS24 598 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 TMTC1Q8IUR5 882 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 NSMCE1Q8WV22 266 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 RAD54LQ92698 747 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 PAGR1Q9BTK6 254 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 DHX36Q9H2U1 1008 aaKnown RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 RIOX1Q9H6W3 641 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 ADAMTS1Q9UHI8 967 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 CTAGE15A4D2H0 777 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 BACH1O14867 736 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 CTAGE8P0CG41 777 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 GGCXP38435 758 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 DNM2P50570 870 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 GFPT1Q06210 699 aaPredicted RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 SF3A3Q12874 501 aaKnown RBP eCLIP13.43□□□□□ -0.263e-6■■■■■ 41.4
USP11-206ENST00000469080 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 GJB7Q6PEY0 223 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 HHIPL2Q6UWX4 724 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 CTAGE6Q86UF2 777 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 CTAGE4Q8IX94 777 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 ZNF577Q9BSK1 485 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 IFIH1Q9BYX4 1025 aaKnown RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 NHEJ1Q9H9Q4 299 aaPredicted RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 BLOC1S4Q9NUP1 217 aa13.43□□□□□ -0.26
USP11-206ENST00000469080 TPX2Q9ULW0 747 aaKnown RBP13.43□□□□□ -0.26
USP11-206ENST00000469080 GAKO14976 1311 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 GCOM1H8Y6P7 765 aaPredicted RBP13.42□□□□□ -0.26
USP11-206ENST00000469080 POLR2MP0CAP2 368 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 MYBP10242 640 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 SLC8A1P32418 973 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 NAPGQ99747 312 aaPredicted RBP13.42□□□□□ -0.26
USP11-206ENST00000469080 HOMER3Q9NSC5 361 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 LRRC53A6NM62 1247 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 EIF3HO15372 352 aaKnown RBP eCLIP13.42□□□□□ -0.26
USP11-206ENST00000469080 FTCDO95954 541 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 PAPOLAP51003 745 aaKnown RBP13.42□□□□□ -0.26
USP11-206ENST00000469080 SLC7A5Q01650 507 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 CXCL9Q07325 125 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 PPP1R18Q6NYC8 613 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 CYB5D1Q6P9G0 228 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 PLEKHG4BQ96PX9 1271 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 CCSER1Q9C0I3 900 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 RABGAP1Q9Y3P9 1069 aa13.42□□□□□ -0.26
USP11-206ENST00000469080 CETN3O15182 167 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 GNAT1P11488 350 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 CASP5P51878 434 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 PDCLQ13371 301 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 KIAA1755Q5JYT7 1200 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 ODR4Q5SWX8 454 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 NAA35Q5VZE5 725 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 TSHZ1Q6ZSZ6 1077 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 ARHGAP22Q7Z5H3 698 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 IRF2BP1Q8IU81 584 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 CCDC50Q8IVM0 306 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 HAS1Q92839 578 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 LACRTQ9GZZ8 138 aa13.41□□□□□ -0.26
USP11-206ENST00000469080 BATF3Q9NR55 127 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms