RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 SLC35C1Q96A29 364 aa22.36■■□□□ 1.17
TUBGCP3-204ENST00000464139 ZBED3Q96IU2 234 aaPredicted RBP22.36■■□□□ 1.17
TUBGCP3-204ENST00000464139 GBP3Q9H0R5 595 aa22.36■■□□□ 1.17
TUBGCP3-204ENST00000464139 PDE11AQ9HCR9 933 aa22.36■■□□□ 1.17
TUBGCP3-204ENST00000464139 SMARCAL1Q9NZC9 954 aa22.36■■□□□ 1.17
TUBGCP3-204ENST00000464139 ZNF536O15090 1300 aa22.36■■□□□ 1.17
TUBGCP3-204ENST00000464139 NFIBO00712 420 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 ITGB5P18084 799 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 KLHDC7AQ5VTJ3 777 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 NACC1Q96RE7 527 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 TEKT3Q9BXF9 490 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 PACSIN1Q9BY11 444 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 WDR11Q9BZH6 1224 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 MYOZ2Q9NPC6 264 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 EHD2Q9NZN4 543 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 RASA3Q14644 834 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 EPHA7Q15375 998 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 CPXCR1Q8N123 301 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 HOOK2Q96ED9 719 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 SPAG5Q96R06 1193 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 HINFPQ9BQA5 517 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 MXRA8Q9BRK3 442 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 LXNQ9BS40 222 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 METTL14Q9HCE5 456 aaKnown RBP22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 PLCB1Q9NQ66 1216 aa22.35■■□□□ 1.17
TUBGCP3-204ENST00000464139 SLC16A3O15427 465 aaKnown RBP22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 ICAM1P05362 532 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 KLRC1P26715 233 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 SETQ01105 290 aaPredicted RBP22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 CASP8Q14790 479 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 IL31RAQ8NI17 732 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 FIZ1Q96SL8 496 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 TLR10Q9BXR5 811 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 HYOU1Q9Y4L1 999 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 EGFRP00533 1210 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 PTK2Q05397 1052 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 IRF2BP2Q7Z5L9 587 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 TXLNBQ8N3L3 684 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 RNF10Q8N5U6 811 aaKnown RBP22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 AJAP1Q9UKB5 411 aaPredicted RBP22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 FRMPD4Q14CM0 1322 aa22.34■■□□□ 1.17
TUBGCP3-204ENST00000464139 PHF20L1A8MW92 1017 aa22.33■■□□□ 1.17
TUBGCP3-204ENST00000464139 EIF3DO15371 548 aaKnown RBP eCLIP22.33■■□□□ 1.17
TUBGCP3-204ENST00000464139 PRLRP16471 622 aa22.33■■□□□ 1.17
TUBGCP3-204ENST00000464139 HSD17B4P51659 736 aa22.33■■□□□ 1.17
TUBGCP3-204ENST00000464139 MAP3K10Q02779 954 aa22.33■■□□□ 1.17
TUBGCP3-204ENST00000464139 B3GNT9Q6UX72 402 aa22.33■■□□□ 1.17
TUBGCP3-204ENST00000464139 HOMER2Q9NSB8 354 aa22.33■■□□□ 1.17
TUBGCP3-204ENST00000464139 MATR3P43243 847 aaKnown RBP eCLIP22.33■■□□□ 1.166e-7■■■□□ 18.2
TUBGCP3-204ENST00000464139 GYS2P54840 703 aa22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 KIAA0753Q2KHM9 967 aa22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 GJB7Q6PEY0 223 aa22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 GBP6Q6ZN66 633 aa22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 ZNF720Q7Z2F6 126 aa22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 ZNF571Q7Z3V5 609 aaPredicted RBP22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 FAM178BQ8IXR5 827 aa22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 RBM46Q8TBY0 533 aaKnown RBP22.33■■□□□ 1.16
TUBGCP3-204ENST00000464139 NAB2Q15742 525 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 ODR4Q5SWX8 454 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 CIAPIN1Q6FI81 312 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 DNAAF5Q86Y56 855 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 CLEC4DQ8WXI8 215 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 SIX2Q9NPC8 291 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 LUC7LQ9NQ29 371 aaKnown RBP22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 KCNH7Q9NS40 1196 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 GCNT4Q9P109 453 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 TARSL2A2RTX5 802 aaKnown RBP22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 LRRIQ3A6PVS8 624 aaPredicted RBP22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 PALMO75781 387 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 ALAS1P13196 640 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 TCP1P17987 556 aaKnown RBP22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 MRPS25P82663 173 aaKnown RBP22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 IQCEQ6IPM2 695 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 MAEAQ7L5Y9 396 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 FAM186BQ8IYM0 893 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 PRPF38AQ8NAV1 312 aaKnown RBP22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 BORCS6Q96GS4 357 aa22.32■■□□□ 1.16
TUBGCP3-204ENST00000464139 N4BP1O75113 896 aaKnown RBP22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 DNA2P51530 1060 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 ZNF131P52739 623 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 GSPT2Q8IYD1 628 aaKnown RBP22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 SPATA4Q8NEY3 305 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 VPS33BQ9H267 617 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 RAVER2Q9HCJ3 691 aaKnown RBP22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 SRCAPQ6ZRS2 3230 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 ARHGEF35A5YM69 484 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 FTCDO95954 541 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 PSMC2P35998 433 aaKnown RBP22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 PLS1Q14651 629 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 GDAP1L1Q96MZ0 367 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 RIT2Q99578 217 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 DEFB129Q9H1M3 183 aa22.31■■□□□ 1.16
TUBGCP3-204ENST00000464139 MYBL2P10244 700 aa22.3■■□□□ 1.16
TUBGCP3-204ENST00000464139 CYP2J2P51589 502 aa22.3■■□□□ 1.16
TUBGCP3-204ENST00000464139 CCDC181Q5TID7 509 aa22.3■■□□□ 1.16
TUBGCP3-204ENST00000464139 MIER3Q7Z3K6 550 aa22.3■■□□□ 1.16
TUBGCP3-204ENST00000464139 MS4A14Q96JA4 679 aa22.3■■□□□ 1.16
TUBGCP3-204ENST00000464139 HIP1RO75146 1068 aa22.3■■□□□ 1.16
TUBGCP3-204ENST00000464139 MUTP22033 750 aa22.3■■□□□ 1.16
TUBGCP3-204ENST00000464139 MUM1L1Q5H9M0 696 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms