RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 SCLYQ96I15 445 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 NIFKQ9BYG3 293 aaKnown RBP13.72□□□□□ -0.21
LTBR-204ENST00000444814 TUFT1Q9NNX1 390 aa13.72□□□□□ -0.21
LTBR-204ENST00000444814 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 ABHD14A-ACY1A0A1B0GW23 586 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 ZBBXA8MT70 800 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 KIF28PB7ZC32 967 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 SYT1P21579 422 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 RFC5P40937 340 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 MRPS6P82932 125 aaKnown RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 PDIA5Q14554 519 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 SHHQ15465 462 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 TRIM71Q2Q1W2 868 aaKnown RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 FAM26DQ5JW98 314 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 ARL6IP4Q66PJ3 421 aaKnown RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 TRMT1LQ7Z2T5 733 aaKnown RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 TPH2Q8IWU9 490 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 METTL13Q8N6R0 699 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 LXNQ9BS40 222 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 FAM49AQ9H0Q0 323 aaPredicted RBP13.71□□□□□ -0.21
LTBR-204ENST00000444814 TRPV2Q9Y5S1 764 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 SLC4A7Q9Y6M7 1214 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 UMODL1Q5DID0 1318 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 LTBP2Q14767 1821 aa13.71□□□□□ -0.21
LTBR-204ENST00000444814 STX6O43752 255 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 ACRP10323 421 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 XRCC6P12956 609 aaKnown RBP eCLIP13.71□□□□□ -0.22
LTBR-204ENST00000444814 TECP42680 631 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 PTGDRQ13258 359 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 KRT79Q5XKE5 535 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 KCTD17Q8N5Z5 321 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 GJA10Q969M2 543 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 CEP170P1Q96L14 293 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 SCLT1Q96NL6 688 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 SLC9A7Q96T83 725 aa13.71□□□□□ -0.22
LTBR-204ENST00000444814 EIF2AK1Q9BQI3 630 aaKnown RBP13.71□□□□□ -0.22
LTBR-204ENST00000444814 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.22
LTBR-204ENST00000444814 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 LYPLA2O95372 231 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 C22orf31O95567 290 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 CXCL10P02778 98 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 CTSHP09668 335 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 YWHABP31946 246 aaKnown RBP13.7□□□□□ -0.22
LTBR-204ENST00000444814 POLGP54098 1239 aaPredicted RBP13.7□□□□□ -0.22
LTBR-204ENST00000444814 MTERF2Q49AM1 385 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 MARCH8Q5T0T0 291 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 PHOSPHO2Q8TCD6 241 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 TCP11Q8WWU5 503 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 NACC1Q96RE7 527 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.7□□□□□ -0.22
LTBR-204ENST00000444814 ANKEF1Q9NU02 776 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 LRWD1Q9UFC0 647 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
LTBR-204ENST00000444814 EML1O00423 815 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 SLC26A4O43511 780 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 ZNF862O60290 1169 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 ATP4AP20648 1035 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
LTBR-204ENST00000444814 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 RAB30Q15771 203 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 OTOP2Q7RTS6 562 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 TRAPPC12Q8WVT3 735 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 DYDC2Q96IM9 177 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 CDK5RAP3Q96JB5 506 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 ZNF396Q96N95 335 aaPredicted RBP13.69□□□□□ -0.22
LTBR-204ENST00000444814 POLR3CQ9BUI4 534 aaPredicted RBP13.69□□□□□ -0.22
LTBR-204ENST00000444814 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
LTBR-204ENST00000444814 INO80BQ9C086 356 aaPredicted RBP13.69□□□□□ -0.22
LTBR-204ENST00000444814 ZMYND15Q9H091 742 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 MSRAQ9UJ68 235 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 PCDHB6Q9Y5E3 794 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
LTBR-204ENST00000444814 AMHP03971 560 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 RPA1P27694 616 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 CCT6AP40227 531 aaKnown RBP13.68□□□□□ -0.22
LTBR-204ENST00000444814 ATP2C1P98194 919 aaPredicted RBP13.68□□□□□ -0.22
LTBR-204ENST00000444814 CYP4A11Q02928 519 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 HIC1Q14526 733 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 UGCGQ16739 394 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 TSHZ1Q6ZSZ6 1077 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 AK8Q96MA6 479 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 HSD17B14Q9BPX1 270 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
LTBR-204ENST00000444814 SUGCTQ9HAC7 445 aa13.68□□□□□ -0.22
LTBR-204ENST00000444814 KAT6AQ92794 2004 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms