RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 COASYQ13057 564 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 IER5Q5VY09 327 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 TYW1BQ6NUM6 668 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 MKL1Q969V6 931 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 SH2D3AQ9BRG2 576 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 CTAGE9A4FU28 777 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 DNERQ8NFT8 737 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 PCDHB4Q9Y5E5 795 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 HIP1RO75146 1068 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 XXYLT1Q8NBI6 393 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 FAM81BQ96LP2 452 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 PDCD2LQ9BRP1 358 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 GDAQ9Y2T3 454 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 ARPP19P56211 112 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 ZNF569Q5MCW4 686 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 CATSPERGQ6ZRH7 1159 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 GSTA5Q7RTV2 222 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 ZKSCAN5Q9Y2L8 839 aa15.36■□□□□ 0.05
SMARCA4-204ENST00000444061 RRN3P2A6NIE6 340 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 CYP2C9P11712 490 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 FAM193AP78312 1265 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 MAP9Q49MG5 647 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 URGCPQ8TCY9 931 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 TIPINQ9BVW5 301 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 SLURP2P0DP57 97 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 ADORA2AP29274 412 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 POLR2BP30876 1174 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 MXD4Q14582 209 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 PRDM10Q9NQV6 1147 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 MYO1AQ9UBC5 1043 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 TCF7P36402 384 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 SREBF1P36956 1147 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 SEL1L2Q5TEA6 688 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 CASP1P29466 404 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 TERF1P54274 439 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 ACTR2P61160 394 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 ZNF746Q6NUN9 644 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 HAUS6Q7Z4H7 955 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 PCSK9Q8NBP7 692 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 PXMP2Q9NR77 195 aa15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 FBXO2Q9UK22 296 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-204ENST00000444061 INTS8Q75QN2 995 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 TEX2Q8IWB9 1127 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 MTUS1Q9ULD2 1270 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 ELF1P32519 619 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 ENOX1Q8TC92 643 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 TMEM143Q96AN5 459 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 FAM107BQ9H098 131 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 DLG5Q8TDM6 1919 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 CICQ96RK0 1608 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 RGPD5Q99666 1765 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 IKBKBO14920 756 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 RFC5P40937 340 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 KCNJ6P48051 423 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 SP3Q02447 781 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 STIM2Q9P246 746 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 SPDYE5A6NIY4 337 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 TUBB4AP04350 444 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 ELMSAN1Q6PJG2 1045 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 RASGRP2Q7LDG7 609 aa15.34■□□□□ 0.05
SMARCA4-204ENST00000444061 MOXD1Q6UVY6 613 aa15.33■□□□□ 0.05
SMARCA4-204ENST00000444061 TMEM60Q9H2L4 133 aa15.33■□□□□ 0.05
SMARCA4-204ENST00000444061 RASAL2Q9UJF2 1139 aa15.33■□□□□ 0.05
SMARCA4-204ENST00000444061 PIN4Q9Y237 131 aaKnown RBP15.33■□□□□ 0.05
SMARCA4-204ENST00000444061 MSH4O15457 936 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 BFSP1Q12934 665 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 SHC4Q6S5L8 630 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 PPP1R9BQ96SB3 815 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 ERICH4A6NGS2 130 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 SLC26A4O43511 780 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 TAX1BP1Q86VP1 789 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 FAM213AQ9BRX8 229 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 ABHD16BQ9H3Z7 469 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 ZC3H4Q9UPT8 1303 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 SMIM22K7EJ46 135 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 ASAP2O43150 1006 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 BEST2Q8NFU1 509 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 THAP9Q9H5L6 903 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 SLC38A10Q9HBR0 1119 aa15.33■□□□□ 0.04
SMARCA4-204ENST00000444061 CTAGE15A4D2H0 777 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 ARHGAP6O43182 974 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 NR3C1P04150 777 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 PRKCBP05771 671 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 CTAGE8P0CG41 777 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 EMC2Q15006 297 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 ZNF667Q5HYK9 610 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 PCNX4Q63HM2 1172 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 CTAGE6Q86UF2 777 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 CTAGE4Q8IX94 777 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 ODF2LQ9ULJ1 636 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 NKRFO15226 690 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 RPA1P27694 616 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms