RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF70Q9UC06 446 aaPredicted RBP11.41□□□□□ -0.58
CD44-210ENST00000434472 ADAMTS1Q9UHI8 967 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 FEM1BQ9UK73 627 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 ZBTB21Q9ULJ3 1066 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 SLX4Q8IY92 1834 aa11.41□□□□□ -0.58
CD44-210ENST00000434472 KIF13BQ9NQT8 1826 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 FRMPD4Q14CM0 1322 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 A0A0A6YYK5 440 aaPredicted RBP11.4□□□□□ -0.58
CD44-210ENST00000434472 SHTN1A0MZ66 631 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 GOLGA6BA6NDN3 693 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 GOLGA8KD6RF30 607 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 GAS7O60861 476 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 SLITRK3O94933 977 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 SYF2O95926 243 aaKnown RBP11.4□□□□□ -0.58
CD44-210ENST00000434472 VIL1P09327 827 aaKnown RBP11.4□□□□□ -0.58
CD44-210ENST00000434472 CCDC172P0C7W6 258 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 STAT1P42224 750 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 GYS2P54840 703 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 HNRNPH2P55795 449 aaKnown RBP11.4□□□□□ -0.58
CD44-210ENST00000434472 TNNC1P63316 161 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 ARID5AQ03989 594 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 PTK2Q05397 1052 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 CTTNQ14247 550 aaKnown RBP11.4□□□□□ -0.58
CD44-210ENST00000434472 MYBPC2Q14324 1141 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 ZSCAN26Q16670 478 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 TCERG1LQ5VWI1 586 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 ALS2CLQ60I27 953 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 HS2ST1Q7LGA3 356 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 TPH2Q8IWU9 490 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 FAM186BQ8IYM0 893 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.4□□□□□ -0.58
CD44-210ENST00000434472 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 RIT2Q99578 217 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 WDR18Q9BV38 432 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 DEFB129Q9H1M3 183 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 VCPKMTQ9H867 229 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
CD44-210ENST00000434472 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
CD44-210ENST00000434472 RSPH10B2B2RC85 870 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 TCP10L2B9ZVM9 353 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 ZMYND10O75800 440 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 RSPH10BP0C881 870 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 ACTN1P12814 892 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 CAPN2P17655 700 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 GUCY2CP25092 1073 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 CHRNA5P30532 468 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 CXCR5P32302 372 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 MATR3P43243 847 aaKnown RBP eCLIP11.39□□□□□ -0.59
CD44-210ENST00000434472 ZNF131P52739 623 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 NPEPPSP55786 919 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 JAM2P57087 298 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 APBA1Q02410 837 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 PAK2Q13177 524 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 ALCAMQ13740 583 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 TNIP1Q15025 636 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 PPP2R5AQ15172 486 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 RPS6KA1Q15418 735 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 CEP55Q53EZ4 464 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 CCDC174Q6PII3 467 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 SND1Q7KZF4 910 aaKnown RBP eCLIP11.39□□□□□ -0.59
CD44-210ENST00000434472 ZNF571Q7Z3V5 609 aaPredicted RBP11.39□□□□□ -0.59
CD44-210ENST00000434472 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 SYCE1Q8N0S2 351 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 SPICE1Q8N0Z3 855 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 SLC35C1Q96A29 364 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 FAM204AQ9H8W3 233 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 RGL1Q9NZL6 768 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
CD44-210ENST00000434472 YDJCA8MPS7 323 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 CLIC2O15247 247 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 TGFB1I1O43294 461 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 HSF2BPO75031 334 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 H2AFZP0C0S5 128 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 MYBL2P10244 700 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 ECE1P42892 770 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 ZNF772Q68DY9 489 aaPredicted RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 ALKBH5Q6P6C2 394 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 H2AFVQ71UI9 128 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 NIPA1Q7RTP0 329 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 GPIHBP1Q8IV16 184 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 SAMD3Q8N6K7 520 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 EIF1ADQ8N9N8 165 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 CYP2W1Q8TAV3 490 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 RUFY1Q96T51 708 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 SIX2Q9NPC8 291 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 RBM12Q9NTZ6 932 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 DMGDHQ9UI17 866 aaKnown RBP11.38□□□□□ -0.59
CD44-210ENST00000434472 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 NENFQ9UMX5 172 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 FRMD4BQ9Y2L6 1034 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 ARHGEF35A5YM69 484 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 A6NNZ2 444 aa11.38□□□□□ -0.59
CD44-210ENST00000434472 FTCDO95954 541 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms