RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 NEK8Q86SG6 692 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 CKAP2LQ8IYA6 745 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 FAM177A1Q8N128 213 aaPredicted RBP14.39□□□□□ -0.11
GPC1-204ENST00000426280 LINC01465Q8N7H1 131 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
GPC1-204ENST00000426280 BANK1Q8NDB2 785 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
GPC1-204ENST00000426280 ARNTL2Q8WYA1 636 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 TOP1MTQ969P6 601 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 RAD9AQ99638 391 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 ZBED2Q9BTP6 218 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 WRAP73Q9P2S5 460 aaPredicted RBP14.39□□□□□ -0.11
GPC1-204ENST00000426280 TRPV2Q9Y5S1 764 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 KAT6AQ92794 2004 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 LINC01553A4QN01 128 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 WDR64B1ANS9 1081 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 ZBTB39O15060 712 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 CCNT1O60563 726 aaKnown RBP14.38□□□□□ -0.11
GPC1-204ENST00000426280 MMP1P03956 469 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 VTNP04004 478 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 KRT2P35908 639 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 HTRA4P83105 476 aaPredicted RBP14.38□□□□□ -0.11
GPC1-204ENST00000426280 PRKCEQ02156 737 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 DRP2Q13474 957 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 TARBP2Q15633 366 aaKnown RBP14.38□□□□□ -0.11
GPC1-204ENST00000426280 MIER3Q7Z3K6 550 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 CRIPAKQ8N1N5 446 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 LRRC71Q8N4P6 559 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 C17orf80Q9BSJ5 609 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 MTUS1Q9ULD2 1270 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 PADI3Q9ULW8 664 aa14.38□□□□□ -0.11
GPC1-204ENST00000426280 NOC2LQ9Y3T9 749 aaKnown RBP14.38□□□□□ -0.11
GPC1-204ENST00000426280 MICAL3Q7RTP6 2002 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 MGEA5O60502 916 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 GPR32O75388 356 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 AMHP03971 560 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 OATP04181 439 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 CLCN3P51790 818 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 SPIRE1Q08AE8 756 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 PPP4R3AQ6IN85 833 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 TSHZ1Q6ZSZ6 1077 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 RSPH3Q86UC2 560 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 DIS3L2Q8IYB7 885 aaKnown RBP14.37□□□□□ -0.11
GPC1-204ENST00000426280 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 GINS2Q9Y248 185 aa14.37□□□□□ -0.11
GPC1-204ENST00000426280 COL1A2P08123 1366 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 A0A087WWV3 80 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 LINC00271P0C7V0 271 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 GATMP50440 423 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 GRB10Q13322 594 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 KIZQ2M2Z5 673 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 IER5Q5VY09 327 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 EFCAB12Q6NXP0 572 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 NME8Q8N427 588 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
GPC1-204ENST00000426280 WASF1Q92558 559 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 GAS2L1Q99501 681 aaPredicted RBP14.36□□□□□ -0.11
GPC1-204ENST00000426280 TMEM60Q9H2L4 133 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 ERVK-5Q9HDB9 667 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 RGL1Q9NZL6 768 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 MTCH2Q9Y6C9 303 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 WDR81Q562E7 1941 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 KDM3AQ9Y4C1 1321 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
GPC1-204ENST00000426280 EFCAB14O75071 495 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 XBP1P17861 261 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 SFNP31947 248 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 JAK3P52333 1124 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 NPEPPSP55786 919 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 ERVK-21P61565 698 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 PPP2R5CQ13362 524 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 MTERF2Q49AM1 385 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 PLA2G4FQ68DD2 849 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 ANO5Q75V66 913 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.35□□□□□ -0.11
GPC1-204ENST00000426280 APBB2Q92870 758 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
GPC1-204ENST00000426280 OSMRQ99650 979 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 NIFKQ9BYG3 293 aaKnown RBP14.35□□□□□ -0.11
GPC1-204ENST00000426280 ADAMTS10Q9H324 1103 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 RC3H2Q9HBD1 1191 aaKnown RBP14.35□□□□□ -0.11
GPC1-204ENST00000426280 NRBP2Q9NSY0 501 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 LOXHD1Q8IVV2 1947 aa14.35□□□□□ -0.11
GPC1-204ENST00000426280 EVPLQ92817 2033 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 DDX11L8A8MPP1 907 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 ST18O60284 1047 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 CSDE1O75534 798 aaKnown RBP14.34□□□□□ -0.11
GPC1-204ENST00000426280 ATP2B1P20020 1258 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 FGFR4P22455 802 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 NFX1Q12986 1120 aaKnown RBP14.34□□□□□ -0.11
GPC1-204ENST00000426280 FAM228AQ86W67 206 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 MICALL1Q8N3F8 863 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 GDPD5Q8WTR4 605 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
GPC1-204ENST00000426280 SEPT9Q9UHD8 586 aaPredicted RBP14.34□□□□□ -0.11
GPC1-204ENST00000426280 ST3GAL5Q9UNP4 418 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms