RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 AK2P54819 239 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 NONOQ15233 471 aaKnown RBP eCLIP10.49□□□□□ -0.73
NUP50-206ENST00000422489 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 PTPROQ16827 1216 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 INF2Q27J81 1249 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 KIZQ2M2Z5 673 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 LETM2Q2VYF4 491 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 EFCAB12Q6NXP0 572 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 EP400NLQ6ZTU2 488 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 MIER3Q7Z3K6 550 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 SLC5A5Q92911 643 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 LENG9Q96B70 501 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 RIT2Q99578 217 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 FTHL17Q9BXU8 183 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 UNC45AQ9H3U1 944 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 GJB4Q9NTQ9 266 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 CEP131Q9UPN4 1083 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 SQORQ9Y6N5 450 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 LAMA2P24043 3122 aaKnown RBP10.49□□□□□ -0.73
NUP50-206ENST00000422489 COL1A2P08123 1366 aa10.49□□□□□ -0.73
NUP50-206ENST00000422489 COL6A3P12111 3177 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 DENND3A2RUS2 1198 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 ZBTB42B2RXF5 422 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 H3BNC9 293 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 GPR182O15218 404 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 MAGEB2O15479 319 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 CSPG5O95196 566 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 C22orf31O95567 290 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 VTNP04004 478 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 BMP1P13497 986 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 TMOD1P28289 359 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 SFNP31947 248 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 BMPR1AP36894 532 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 NEK4P51957 841 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 JAK3P52333 1124 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 CRYBB1P53674 252 aaPredicted RBP10.48□□□□□ -0.73
NUP50-206ENST00000422489 ANAPC15P60006 121 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 Q4G0T1 1027 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 PAN2Q504Q3 1202 aaKnown RBP10.48□□□□□ -0.73
NUP50-206ENST00000422489 ODR4Q5SWX8 454 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 ZNF668Q96K58 619 aaPredicted RBP10.48□□□□□ -0.73
NUP50-206ENST00000422489 FAM167AQ96KS9 214 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 UHRF1Q96T88 793 aaPredicted RBP10.48□□□□□ -0.73
NUP50-206ENST00000422489 OSMRQ99650 979 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 ORC3Q9UBD5 711 aaPredicted RBP10.48□□□□□ -0.73
NUP50-206ENST00000422489 DDX25Q9UHL0 483 aaKnown RBP10.48□□□□□ -0.73
NUP50-206ENST00000422489 ST3GAL5Q9UNP4 418 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 AKT3Q9Y243 479 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 IGSF9BQ9UPX0 1349 aa10.48□□□□□ -0.73
NUP50-206ENST00000422489 TANC1Q9C0D5 1861 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 TRIP12Q14669 1992 aaPredicted RBP10.47□□□□□ -0.73
NUP50-206ENST00000422489 CYP3A7-CYP3A51PA0A087WV96 503 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 M0R2N6 131 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 ZNF862O60290 1169 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 EIF5BO60841 1220 aaKnown RBP10.47□□□□□ -0.73
NUP50-206ENST00000422489 DGKIO75912 1065 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 OATP04181 439 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 CYP3A7P24462 503 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 CLCN3P51790 818 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 FOSBP53539 338 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 NLRP11P59045 1033 aaKnown RBP10.47□□□□□ -0.73
NUP50-206ENST00000422489 UGCGQ16739 394 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 SPOUT1Q5T280 376 aaKnown RBP10.47□□□□□ -0.73
NUP50-206ENST00000422489 NPAS4Q8IUM7 802 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 LRRC71Q8N4P6 559 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 DAGLBQ8NCG7 672 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 LINC01599Q8WXQ3 324 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 WASF1Q92558 559 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 MRPL38Q96DV4 380 aaKnown RBP10.47□□□□□ -0.73
NUP50-206ENST00000422489 SCLT1Q96NL6 688 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 NECAB3Q96P71 396 aaPredicted RBP10.47□□□□□ -0.73
NUP50-206ENST00000422489 MAP7D2Q96T17 732 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 ADAM2Q99965 735 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 TMX1Q9H3N1 280 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 ERVK-5Q9HDB9 667 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 PCDHB7Q9Y5E2 793 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 KDM3AQ9Y4C1 1321 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 CHD9Q3L8U1 2897 aa10.47□□□□□ -0.73
NUP50-206ENST00000422489 TET1Q8NFU7 2136 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 CCNT1O60563 726 aaKnown RBP10.46□□□□□ -0.73
NUP50-206ENST00000422489 PSMD10O75832 226 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 CTDNEP1O95476 244 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 SEC24BO95487 1268 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 RB1P06400 928 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 GATMP50440 423 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 PRKCEQ02156 737 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 TBC1D8BQ0IIM8 1120 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 NPY5RQ15761 445 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 ME3Q16798 604 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 MTERF2Q49AM1 385 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 PIK3AP1Q6ZUJ8 805 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 NEK8Q86SG6 692 aa10.46□□□□□ -0.73
NUP50-206ENST00000422489 FAM177A1Q8N128 213 aaPredicted RBP10.46□□□□□ -0.73
NUP50-206ENST00000422489 BANK1Q8NDB2 785 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms