RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 RTN4RL1Q86UN2 441 aaPredicted RBP10.7□□□□□ -0.7
NUP50-205ENST00000419387 SMAP1Q8IYB5 467 aaPredicted RBP10.7□□□□□ -0.7
NUP50-205ENST00000419387 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 ATP8B4Q8TF62 1192 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 ZNF689Q96CS4 500 aaPredicted RBP10.7□□□□□ -0.7
NUP50-205ENST00000419387 MRPL38Q96DV4 380 aaKnown RBP10.7□□□□□ -0.7
NUP50-205ENST00000419387 ZNF274Q96GC6 653 aaPredicted RBP10.7□□□□□ -0.7
NUP50-205ENST00000419387 FTHL17Q9BXU8 183 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 TM6SF1Q9BZW5 370 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 VPS54Q9P1Q0 977 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 PADI3Q9ULW8 664 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 PCDHA10Q9Y5I2 948 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 MAFBQ9Y5Q3 323 aaPredicted RBP10.7□□□□□ -0.7
NUP50-205ENST00000419387 GTF3C3Q9Y5Q9 886 aa10.7□□□□□ -0.7
NUP50-205ENST00000419387 COL1A2P08123 1366 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 IGSF9BQ9UPX0 1349 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.69□□□□□ -0.7
NUP50-205ENST00000419387 EDIL3O43854 480 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 RB1P06400 928 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 PSAPP07602 524 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 USP11P51784 963 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 NLRP5P59047 1200 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 KRT76Q01546 638 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 PAK2Q13177 524 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 TRIM22Q8IYM9 498 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 KIAA0319LQ8IZA0 1049 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 LINC01599Q8WXQ3 324 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
NUP50-205ENST00000419387 RC3H2Q9HBD1 1191 aaKnown RBP10.69□□□□□ -0.7
NUP50-205ENST00000419387 TCEAL9Q9UHQ7 104 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 RWDD3Q9Y3V2 267 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 TTC28Q96AY4 2481 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 SIP14410 1827 aa10.69□□□□□ -0.7
NUP50-205ENST00000419387 COL4A4P53420 1690 aaPredicted RBP10.69□□□□□ -0.7
NUP50-205ENST00000419387 TRANK1O15050 2925 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 ADGRA3Q8IWK6 1321 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 ZBTB42B2RXF5 422 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 CPLX1O14810 134 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 DGKIO75912 1065 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 DEXIO95424 95 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 BMPR1AP36894 532 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 BTG3Q14201 252 aaPredicted RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 CPLX2Q6PUV4 134 aaKnown RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 FAM43BQ6ZT52 329 aaPredicted RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 TRMT1LQ7Z2T5 733 aaKnown RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 CRIPAKQ8N1N5 446 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 CLP1Q92989 425 aaKnown RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 LENG9Q96B70 501 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 NECAB3Q96P71 396 aaPredicted RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 UPF3BQ9BZI7 483 aaKnown RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 UBE2ZQ9H832 354 aaPredicted RBP10.68□□□□□ -0.7
NUP50-205ENST00000419387 CDHR5Q9HBB8 845 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 PDRG1Q9NUG6 133 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 GABBR1Q9UBS5 961 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 PCDHA4Q9UN74 947 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 SAMM50Q9Y512 469 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 COL4A6Q14031 1691 aa10.68□□□□□ -0.7
NUP50-205ENST00000419387 TCF20Q9UGU0 1960 aaKnown RBP10.67□□□□□ -0.7
NUP50-205ENST00000419387 WDR64B1ANS9 1081 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 C5orf67F2Z3F1 127 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 MSH4O15457 936 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 LINC00271P0C7V0 271 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 STAG3L1P0CL83 205 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 CTNNB1P35222 781 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 NFX1Q12986 1120 aaKnown RBP10.67□□□□□ -0.7
NUP50-205ENST00000419387 STK3Q13188 491 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 TMEM266Q2M3C6 531 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 TIGD5Q53EQ6 642 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 ODR4Q5SWX8 454 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 NPAS4Q8IUM7 802 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 BANK1Q8NDB2 785 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 TBCKQ8TEA7 893 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 TMX1Q9H3N1 280 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 DISC1Q9NRI5 854 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 NRBP2Q9NSY0 501 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 GINS2Q9Y248 185 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 NOC2LQ9Y3T9 749 aaKnown RBP10.67□□□□□ -0.7
NUP50-205ENST00000419387 TTC3P53804 2025 aa10.67□□□□□ -0.7
NUP50-205ENST00000419387 CYP3A7-CYP3A51PA0A087WV96 503 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 M0R2N6 131 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 GPR182O15218 404 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 MAGEB2O15479 319 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 GAS7O60861 476 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 C22orf31O95567 290 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 CYP3A7P24462 503 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 CRYBB1P53674 252 aaPredicted RBP10.66□□□□□ -0.7
NUP50-205ENST00000419387 LEXMQ3ZCV2 418 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 Q4G0T1 1027 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 GALNT17Q6IS24 598 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 CMTR2Q8IYT2 770 aaKnown RBP10.66□□□□□ -0.7
NUP50-205ENST00000419387 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
NUP50-205ENST00000419387 METTL13Q8N6R0 699 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 DAGLBQ8NCG7 672 aa10.66□□□□□ -0.7
NUP50-205ENST00000419387 TMEM40Q8WWA1 233 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms