RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 UPP2O95045 317 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 C22orf31O95567 290 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 CD52P31358 61 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 PRKCEQ02156 737 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 KIAA0319LQ8IZA0 1049 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 PPM1EQ8WY54 764 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
NUP50-204ENST00000417702 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
NUP50-204ENST00000417702 GINS2Q9Y248 185 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 LINC01553A4QN01 128 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 RFXAPO00287 272 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 ZNF862O60290 1169 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 MMP1P03956 469 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 TMOD1P28289 359 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 FOSBP53539 338 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 HTRA4P83105 476 aaPredicted RBP17.25■□□□□ 0.35
NUP50-204ENST00000417702 PAK2Q13177 524 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 NR5A1Q13285 461 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 CCDC83Q8IWF9 413 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 FTHL17Q9BXU8 183 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 AGO3Q9H9G7 860 aaKnown RBP17.25■□□□□ 0.35
NUP50-204ENST00000417702 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
NUP50-204ENST00000417702 CDH23Q9H251 3354 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 PTPRSQ13332 1948 aa17.25■□□□□ 0.35
NUP50-204ENST00000417702 EPOPA6NHQ4 379 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 ENPP3O14638 875 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 TBX3O15119 743 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 BAG4O95429 457 aaKnown RBP17.24■□□□□ 0.35
NUP50-204ENST00000417702 ERVK-21P61565 698 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 ST3GAL1Q11201 340 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
NUP50-204ENST00000417702 UGCGQ16739 394 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 KRT40Q6A162 431 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 DIS3L2Q8IYB7 885 aaKnown RBP17.24■□□□□ 0.35
NUP50-204ENST00000417702 MICALL1Q8N3F8 863 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 KIF2CQ99661 725 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 LLPHQ9BRT6 129 aaKnown RBP17.24■□□□□ 0.35
NUP50-204ENST00000417702 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
NUP50-204ENST00000417702 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
NUP50-204ENST00000417702 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
NUP50-204ENST00000417702 EVPLQ92817 2033 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 BTBD18B2RXH4 712 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 RBM25P49756 843 aaKnown RBP17.23■□□□□ 0.35
NUP50-204ENST00000417702 PSMC5P62195 406 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 NFX1Q12986 1120 aaKnown RBP17.23■□□□□ 0.35
NUP50-204ENST00000417702 PPP2R5CQ13362 524 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 CCDC85BQ15834 202 aaPredicted RBP17.23■□□□□ 0.35
NUP50-204ENST00000417702 XKR3Q5GH77 459 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 EARS2Q5JPH6 523 aaKnown RBP17.23■□□□□ 0.35
NUP50-204ENST00000417702 EFCAB12Q6NXP0 572 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
NUP50-204ENST00000417702 ZNF710Q8N1W2 664 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 SP7Q8TDD2 431 aaPredicted RBP17.23■□□□□ 0.35
NUP50-204ENST00000417702 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 SEPT9Q9UHD8 586 aaPredicted RBP17.23■□□□□ 0.35
NUP50-204ENST00000417702 MTUS1Q9ULD2 1270 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 AKT3Q9Y243 479 aa17.23■□□□□ 0.35
NUP50-204ENST00000417702 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 DKC1O60832 514 aaKnown RBP eCLIP17.22■□□□□ 0.35
NUP50-204ENST00000417702 RPS6KA5O75582 802 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 POU3F3P20264 500 aaPredicted RBP17.22■□□□□ 0.35
NUP50-204ENST00000417702 CLCN3P51790 818 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
NUP50-204ENST00000417702 HMGN5P82970 282 aaKnown RBP17.22■□□□□ 0.35
NUP50-204ENST00000417702 TBC1D8BQ0IIM8 1120 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 GRB10Q13322 594 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 RABEP1Q15276 862 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 PPP1R16BQ96T49 567 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 NIFKQ9BYG3 293 aaKnown RBP17.22■□□□□ 0.35
NUP50-204ENST00000417702 TSPYL2Q9H2G4 693 aaPredicted RBP17.22■□□□□ 0.35
NUP50-204ENST00000417702 SUGCTQ9HAC7 445 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 VAV3Q9UKW4 847 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
NUP50-204ENST00000417702 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 EML1O00423 815 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 GPR182O15218 404 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 VTNP04004 478 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 KIZQ2M2Z5 673 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 MTERF2Q49AM1 385 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 BANK1Q8NDB2 785 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 HAS1Q92839 578 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 SAMD11Q96NU1 681 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 NOC2LQ9Y3T9 749 aaKnown RBP17.21■□□□□ 0.35
NUP50-204ENST00000417702 MTCH2Q9Y6C9 303 aa17.21■□□□□ 0.35
NUP50-204ENST00000417702 TTC3P53804 2025 aa17.2■□□□□ 0.34
NUP50-204ENST00000417702 WDR81Q562E7 1941 aa17.2■□□□□ 0.34
NUP50-204ENST00000417702 SIP14410 1827 aa17.2■□□□□ 0.34
NUP50-204ENST00000417702 ST18O60284 1047 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 312.7 ms