RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
SBDSP1-201ENST00000415772 KDM3AQ9Y4C1 1321 aa17.71■□□□□ 0.42
SBDSP1-201ENST00000415772 GATMP50440 423 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 UBE3AQ05086 875 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 NECTIN1Q15223 517 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 HFE2Q6ZVN8 426 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 TRMT1LQ7Z2T5 733 aaKnown RBP17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 ATP8B4Q8TF62 1192 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 FBXL18Q96ME1 805 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 ATP6V0A4Q9HBG4 840 aa17.7■□□□□ 0.42
SBDSP1-201ENST00000415772 DNAJB1P25685 340 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 SREBF1P36956 1147 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 MRE11P49959 708 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 SWSAP1Q6NVH7 229 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 SLC24A5Q71RS6 500 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 SUGP1Q8IWZ8 645 aaKnown RBP17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 METTL13Q8N6R0 699 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 PPP1R16BQ96T49 567 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 TLR9Q9NR96 1032 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 TMEM260Q9NX78 707 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 BARHL2Q9NY43 387 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 BARX2Q9UMQ3 279 aaPredicted RBP17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 NOC2LQ9Y3T9 749 aaKnown RBP17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 BRWD1Q9NSI6 2320 aa17.69■□□□□ 0.42
SBDSP1-201ENST00000415772 KLF18A0A0U1RQI7 1052 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 MEIS1O00470 390 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 ATG7O95352 703 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 EYA4O95677 639 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 TTC3P53804 2025 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 NHLH1Q02575 133 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 CAMK1Q14012 370 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 JAKMIP3Q5VZ66 844 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 NIPA1Q7RTP0 329 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 ABI1Q8IZP0 508 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 CCDC12Q8WUD4 166 aaPredicted RBP17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 EDAQ92838 391 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 MSLNLQ96KJ4 702 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 ZNF577Q9BSK1 485 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 TMX1Q9H3N1 280 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 ERVK-5Q9HDB9 667 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 RGS18Q9NS28 235 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 PUF60Q9UHX1 559 aaKnown RBP17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 ST3GAL5Q9UNP4 418 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 SAMM50Q9Y512 469 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 ATG2AQ2TAZ0 1938 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 KIAA1671Q9BY89 1806 aa17.68■□□□□ 0.42
SBDSP1-201ENST00000415772 IPO5O00410 1097 aaKnown RBP17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 FGF18O76093 207 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 LAG3P18627 525 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 SETQ01105 290 aaPredicted RBP17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 COASYQ13057 564 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 KRT32Q14532 448 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 KIZQ2M2Z5 673 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 ERICH6BQ5W0A0 696 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 PDE12Q6L8Q7 609 aaKnown RBP17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 ABHD15Q6UXT9 468 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 DHX32Q7L7V1 743 aaKnown RBP17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 CCDC60Q8IWA6 550 aaPredicted RBP17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 SMRP1Q8NCR6 262 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 PBXIP1Q96AQ6 731 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 RPGRIP1Q96KN7 1286 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 SCLT1Q96NL6 688 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 MAP7D2Q96T17 732 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 CDCA3Q99618 268 aaPredicted RBP17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 OSMRQ99650 979 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 C6orf50Q9HD87 102 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 ENTPD7Q9NQZ7 604 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 TBC1D22BQ9NU19 505 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 CEP131Q9UPN4 1083 aa17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 USP15Q9Y4E8 981 aaPredicted RBP17.67■□□□□ 0.42
SBDSP1-201ENST00000415772 CCDC196A0A1B0GTZ2 297 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 PER2O15055 1255 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 HOXA2O43364 376 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 PSAPP07602 524 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 ZSCAN20P17040 1043 aaPredicted RBP17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 TMOD1P28289 359 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 CRYBB1P53674 252 aaPredicted RBP17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 TYW1BQ6NUM6 668 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 ZBTB33Q86T24 672 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 KIAA0319LQ8IZA0 1049 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 CRIPAKQ8N1N5 446 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 COLGALT1Q8NBJ5 622 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 BBXQ8WY36 941 aaPredicted RBP17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 TCEANC2Q96MN5 208 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 PHF7Q9BWX1 381 aaPredicted RBP17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 TYW1Q9NV66 732 aaKnown RBP17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 CLEC1BQ9P126 229 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 AKT3Q9Y243 479 aa17.66■□□□□ 0.42
SBDSP1-201ENST00000415772 IGKV6D-21A0A0A0MT36 114 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 TMEM221A6NGB7 291 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 M0R296 226 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 MGEA5O60502 916 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 CCNE2O96020 404 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms