RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 HOMER1Q86YM7 354 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 PCDH19Q8TAB3 1148 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 SLC7A14Q8TBB6 771 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 EDAQ92838 391 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 SCYL1Q96KG9 808 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 TRIM39Q9HCM9 518 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 SFMBT1Q9UHJ3 866 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 ZFR2Q9UPR6 939 aaKnown RBP6.3□□□□□ -1.4
CLK1-203ENST00000409769 TBX22Q9Y458 520 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 TELO2Q9Y4R8 837 aa6.3□□□□□ -1.4
CLK1-203ENST00000409769 ENPP3O14638 875 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 NPTXRO95502 500 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 CRTAMO95727 393 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 GJA4P35212 333 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 RAC3P60763 192 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 GUCY1A3Q02108 690 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 DBPQ10586 325 aaPredicted RBP6.29□□□□□ -1.4
CLK1-203ENST00000409769 NUP160Q12769 1436 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 CEP170Q5SW79 1584 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 C16orf59Q7L2K0 433 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 MTDHQ86UE4 582 aaKnown RBP6.29□□□□□ -1.4
CLK1-203ENST00000409769 JAZF1Q86VZ6 243 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 RBM12BQ8IXT5 1001 aaKnown RBP6.29□□□□□ -1.4
CLK1-203ENST00000409769 MAGEB10Q96LZ2 347 aaPredicted RBP6.29□□□□□ -1.4
CLK1-203ENST00000409769 TACO1Q9BSH4 297 aaKnown RBP6.29□□□□□ -1.4
CLK1-203ENST00000409769 IPPKQ9H8X2 491 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 NDOR1Q9UHB4 597 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 FBXO10Q9UK96 956 aa6.29□□□□□ -1.4
CLK1-203ENST00000409769 ESYT3A0FGR9 886 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 ACOT7O00154 380 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 GSTA4O15217 222 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 IL18BPO95998 194 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 SLPIP03973 132 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 TOP3AQ13472 1001 aaPredicted RBP6.28□□□□□ -1.4
CLK1-203ENST00000409769 TCEA2Q15560 299 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 C16orf86Q6ZW13 317 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 CXXC5Q7LFL8 322 aaKnown RBP6.28□□□□□ -1.4
CLK1-203ENST00000409769 GPR155Q7Z3F1 870 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 APPBP2Q92624 585 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 FBXW5Q969U6 566 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
CLK1-203ENST00000409769 SCLYQ96I15 445 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 LRRC37BQ96QE4 947 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 PCED1AQ9H1Q7 454 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 SLITRK6Q9H5Y7 841 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 PCDHA8Q9Y5H6 950 aa6.28□□□□□ -1.4
CLK1-203ENST00000409769 FOXS1O43638 330 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 APPP05067 770 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 COMTP21964 271 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 ETV4P43268 484 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 GPR19Q15760 415 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 BRAPQ7Z569 592 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 TAX1BP1Q86VP1 789 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 ZFPM1Q8IX07 1006 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 GNRHR2Q96P88 292 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 ARHGAP28Q9P2N2 729 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 SRPK3Q9UPE1 567 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 PCDHA9Q9Y5H5 950 aa6.27□□□□□ -1.41
CLK1-203ENST00000409769 MRPL42Q9Y6G3 142 aaKnown RBP6.27□□□□□ -1.41
CLK1-203ENST00000409769 KIAA0586Q9BVV6 1533 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 TCRBV16S1A1N1A0A5B0 115 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 TLDC2A0PJX2 215 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 RAD17O75943 681 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 KCNA6P17658 529 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 PTPN1P18031 435 aaKnown RBP6.26□□□□□ -1.41
CLK1-203ENST00000409769 LACTBP83111 547 aaPredicted RBP6.26□□□□□ -1.41
CLK1-203ENST00000409769 PURAQ00577 322 aaKnown RBP6.26□□□□□ -1.41
CLK1-203ENST00000409769 FIGNQ5HY92 759 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 MIIPQ5JXC2 388 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 BTBD8Q5XKL5 378 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 EP400NLQ6ZTU2 488 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 POLNQ7Z5Q5 900 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 KIAA0907Q7Z7F0 614 aaPredicted RBP6.26□□□□□ -1.41
CLK1-203ENST00000409769 CLUHP3Q96NS8 147 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 ADOQ96SZ5 270 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 CELF4Q9BZC1 486 aaKnown RBP6.26□□□□□ -1.41
CLK1-203ENST00000409769 OAZ3Q9UMX2 235 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 SLC30A1Q9Y6M5 507 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 IQGAP2Q13576 1575 aa6.26□□□□□ -1.41
CLK1-203ENST00000409769 CEP162Q5TB80 1403 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 B4E1Z4 1266 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 PPP1R12AO14974 1030 aaPredicted RBP6.25□□□□□ -1.41
CLK1-203ENST00000409769 IGSF3O75054 1194 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 RAPGEF3O95398 923 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 ASMTLO95671 621 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 ZNF888P0CJ79 500 aaPredicted RBP6.25□□□□□ -1.41
CLK1-203ENST00000409769 CR2P20023 1033 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 FOXE3Q13461 319 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 FAM47CQ5HY64 1035 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 RNF207Q6ZRF8 634 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 SH3RF2Q8TEC5 729 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 FAM89AQ96GI7 184 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 ZNF341Q9BYN7 854 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 CD244Q9BZW8 370 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 SLC39A2Q9NP94 309 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 INTS7Q9NVH2 962 aaKnown RBP6.25□□□□□ -1.41
CLK1-203ENST00000409769 RIC8BQ9NVN3 520 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 FANCLQ9NW38 375 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 HS3ST3A1Q9Y663 406 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms