RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 FAM107AO95990 144 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 RUBCNQ92622 972 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 ORAI2Q96SN7 254 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 PRKAG2Q9UGJ0 569 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 BCS1LQ9Y276 419 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 EMBQ6PCB8 327 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 GRAMD1AQ96CP6 724 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 XPO4Q9C0E2 1151 aaKnown RBP15.75■□□□□ 0.11
CCDC50-201ENST00000392455 SYNGAP1Q96PV0 1343 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 TBC1D4O60343 1298 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 KIAA1755Q5JYT7 1200 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 ADCK1Q86TW2 530 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 INPP5AQ14642 412 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 ME3Q16798 604 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 SSH2Q76I76 1423 aa15.75■□□□□ 0.11
CCDC50-201ENST00000392455 GOLPH3LQ9H4A5 285 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 PCDHB4Q9Y5E5 795 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 ZMYM6O95789 1325 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 NCKAP1LP55160 1127 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 MYL7Q01449 175 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 CDR2LQ86X02 465 aaPredicted RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 TEKT3Q9BXF9 490 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 LSG1Q9H089 658 aaKnown RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 EPS8L2Q9H6S3 715 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 TMEM206Q9H813 350 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 POTEFA5A3E0 1075 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 AASDHQ4L235 1098 aaPredicted RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 PBXIP1Q96AQ6 731 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 EPN1Q9Y6I3 576 aaPredicted RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 CCDC22O60826 627 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 KSR1Q8IVT5 923 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 ELMOD1Q8N336 334 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 CARD9Q9H257 536 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 PRPSAP2O60256 369 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 FOSP01100 380 aaPredicted RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 SZRD1Q7Z422 152 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 PCDHB8Q9UN66 801 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 M0R3G1 203 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 ZSCAN20P17040 1043 aaPredicted RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 POLA2Q14181 598 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 GPR162Q16538 588 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 ERICH1Q86X53 443 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 FAM32AQ9Y421 112 aaKnown RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 SRPRBQ9Y5M8 271 aaKnown RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 ARHGEF10O15013 1369 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 TMED10P49755 219 aaKnown RBP15.74■□□□□ 0.11
CCDC50-201ENST00000392455 NDUFA5Q16718 116 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 MEI1Q5TIA1 1274 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 KIAA1841Q6NSI8 718 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 PYROXD1Q8WU10 500 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 OSBPL10Q9BXB5 764 aa15.74■□□□□ 0.11
CCDC50-201ENST00000392455 LRRIQ4A6NIV6 560 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 GYG1P46976 350 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 COPS2P61201 443 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 TTC39CQ8N584 583 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 ZSCAN9O15535 394 aaPredicted RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 DARS2Q6PI48 645 aaKnown RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 C11orf88Q6PI97 169 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 FBXO11Q86XK2 927 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 B4GALNT2Q8NHY0 566 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 DDI1Q8WTU0 396 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 DCPSQ96C86 337 aaKnown RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 KIAA1468Q9P260 1216 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 PFKFB1P16118 471 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 NNMTP40261 264 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 RPS8P62241 208 aaKnown RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 CCNA1P78396 465 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 SMARCAD1Q9H4L7 1026 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 ECT2Q9H8V3 914 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 ATXN3P54252 364 aaPredicted RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 ETF1P62495 437 aaKnown RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 IRX1P78414 480 aaPredicted RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 LRRC4Q9HBW1 653 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 CSTF3Q12996 717 aaKnown RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 ULK4Q96C45 1275 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 DMC1Q14565 340 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 TMED2Q15363 201 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 CNGA3Q16281 694 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 IFNL3Q8IZI9 196 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 TAB3Q8N5C8 712 aaPredicted RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 LARP4BQ92615 738 aaKnown RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 RGL1Q9NZL6 768 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 CDC23Q9UJX2 597 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 MED23Q9ULK4 1368 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 TBC1D12O60347 775 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 BCAMP50895 628 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
CCDC50-201ENST00000392455 KLHL38Q2WGJ6 581 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 PIGUQ9H490 435 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 BATF3Q9NR55 127 aa15.73■□□□□ 0.11
CCDC50-201ENST00000392455 ATP5JP18859 108 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ARMCX5Q6P1M9 558 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ZFYVE19Q96K21 471 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 EPC1Q9H2F5 836 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms