RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CEP152O94986 1710 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 RASGRF2O14827 1237 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 PLS3P13797 630 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 CA4P22748 312 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 CRKP46108 304 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 RASSF2P50749 326 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 APBA1Q02410 837 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TSNAXIP1Q2TAA8 658 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 QRICH1Q2TAL8 776 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TMEM270Q6UE05 265 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 KDELC2Q7Z4H8 507 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 AK8Q96MA6 479 aa5.39□□□□□ -1.55
LTN1-202ENST00000389194 TTC36A6NLP5 189 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 ZBTB7AO95365 584 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 MX2P20592 715 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 GRAPQ13588 217 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 HADHQ16836 314 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 ZC2HC1CQ53FD0 456 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 GALNT17Q6IS24 598 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 GRAPLQ8TC17 118 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 NLRP7Q8WX94 980 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 HEXIM2Q96MH2 286 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 IFT122Q9HBG6 1241 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 ADGRL3Q9HAR2 1447 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 EIF3CLB5ME19 914 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 GIPC1O14908 333 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 PDHA1P08559 390 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 NCF2P19878 526 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 SOX11P35716 441 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 DRAP1Q14919 205 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 SLC27A3Q5K4L6 730 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 FBXW10Q5XX13 1052 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 SEPT12Q8IYM1 358 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 NACC1Q96RE7 527 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 EIF3CQ99613 913 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 TRIM51Q9BSJ1 452 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 SLC24A3Q9HC58 644 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 SAYSD1Q9NPB0 183 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 IL31Q6EBC2 164 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 DNAJC24Q6P3W2 148 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 ACCSQ96QU6 501 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 SMYD3Q9H7B4 428 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 HESX1Q9UBX0 185 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 ABCA6Q8N139 1617 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 MMEP08473 750 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 RFC1P35251 1148 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 ARHGAP4P98171 946 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 CC2D2BQ6DHV5 1058 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 DPP9Q86TI2 863 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 ZNF710Q8N1W2 664 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 CELF4Q9BZC1 486 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 NRKQ7Z2Y5 1582 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 F5H6K3 240 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 FTLP02792 175 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 KLRC3Q07444 240 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 GPR162Q16538 588 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 CDR2LQ86X02 465 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 PIP4K2CQ8TBX8 421 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 ACSF2Q96CM8 615 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 KAZALD1Q96I82 304 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 RMDN3Q96TC7 470 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 CNOT8Q9UFF9 292 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 MRFAP1Q9Y605 127 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 CPSF1Q10570 1443 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 K7ERI5 159 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 SUN1O94901 812 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 MYBP10242 640 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 NFX1Q12986 1120 aaKnown RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 UNC13DQ70J99 1090 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 CCDC33Q8N5R6 958 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 NUF2Q9BZD4 464 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 OSBPL5Q9H0X9 879 aaPredicted RBP5.38□□□□□ -1.55
LTN1-202ENST00000389194 CRB1P82279 1406 aa5.38□□□□□ -1.55
LTN1-202ENST00000389194 CPS1P31327 1500 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 NEO1Q92859 1461 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 A6NJR5 290 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 GMNNO75496 209 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 MAP3K6O95382 1288 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 ATXN3P54252 364 aaPredicted RBP5.37□□□□□ -1.55
LTN1-202ENST00000389194 TMEM259Q4ZIN3 620 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 LGSNQ5TDP6 509 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 PDCD7Q8N8D1 485 aaKnown RBP5.37□□□□□ -1.55
LTN1-202ENST00000389194 PPP4R1Q8TF05 950 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 RAD54LQ92698 747 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 N4BP2L2Q92802 583 aaPredicted RBP5.37□□□□□ -1.55
LTN1-202ENST00000389194 ISCA1Q9BUE6 129 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 MSTO1Q9BUK6 570 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 ZCWPW1Q9H0M4 648 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 ANLNQ9NQW6 1124 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 STK17AQ9UEE5 414 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 NUB1Q9Y5A7 615 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 SLC4A7Q9Y6M7 1214 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 NPHP4O75161 1426 aaPredicted RBP5.37□□□□□ -1.55
LTN1-202ENST00000389194 SPHKAPQ2M3C7 1700 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 ALKQ9UM73 1620 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 ATP10DQ9P241 1426 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 ERVV-1B6SEH8 477 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 ZBTB5O15062 677 aa5.37□□□□□ -1.55
LTN1-202ENST00000389194 DKC1O60832 514 aaKnown RBP eCLIP5.37□□□□□ -1.55
LTN1-202ENST00000389194 MSH2P43246 934 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms