RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 HOXA7P31268 230 aaPredicted RBP17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 KLHL30Q0D2K2 578 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 ITGB3BPQ13352 177 aaPredicted RBP17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 FAM178BQ8IXR5 827 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 MSANTD4Q8NCY6 345 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 ZKSCAN4Q969J2 545 aaPredicted RBP17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 TAAR1Q96RJ0 339 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 ZMYND15Q9H091 742 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 CCDC151A5D8V7 595 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 TISP43B9A030 160 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 LCA5LO95447 670 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 SERPING1P05155 500 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 PON1P27169 355 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 MATR3P43243 847 aaKnown RBP eCLIP17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 HSD17B4P51659 736 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 MRPS9P82933 396 aaKnown RBP17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 PTPROQ16827 1216 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 EXOC3L4Q17RC7 722 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 MIER3Q7Z3K6 550 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 FRMD5Q7Z6J6 570 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 STK24Q9Y6E0 443 aa17.54■□□□□ 0.4
CNKSR1-202ENST00000374253 EPB41P11171 864 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 VCAM1P19320 739 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 SPP2Q13103 211 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 NSMFQ6X4W1 530 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 SLC35C1Q96A29 364 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 SPAG5Q96R06 1193 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 FIZ1Q96SL8 496 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 DEFB129Q9H1M3 183 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 OLFML3Q9NRN5 406 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 ARHGEF35A5YM69 484 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 PLA2G6O60733 806 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 HIP1RO75146 1068 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 UCHL3P15374 230 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 RPS6P62753 249 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 EPHA7Q15375 998 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 ASIC2Q16515 512 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 GSPT2Q8IYD1 628 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 TRIM58Q8NG06 486 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 RPAP3Q9H6T3 665 aaPredicted RBP17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 GCNT4Q9P109 453 aa17.53■□□□□ 0.4
CNKSR1-202ENST00000374253 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 SETQ01105 290 aaPredicted RBP17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 MAP3K10Q02779 954 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 PTK2Q05397 1052 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 BMT2Q1RMZ1 405 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 BEND6Q5SZJ8 279 aaPredicted RBP17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 DPY19L2P1Q6NXN4 242 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 RBM46Q8TBY0 533 aaKnown RBP17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 SYTL5Q8TDW5 730 aaPredicted RBP17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 PACSIN2Q9UNF0 486 aaPredicted RBP17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 PCNTO95613 3336 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 ATAD5Q96QE3 1844 aa17.52■□□□□ 0.4
CNKSR1-202ENST00000374253 SSU72P8A0A1W2PR75 194 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 WDR46O15213 610 aaKnown RBP17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 SORBS3O60504 671 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 GAP43P17677 238 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 RPL13P26373 211 aaKnown RBP17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 BRD3Q15059 726 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 TKFCQ3LXA3 575 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 UTP14CQ5TAP6 766 aaKnown RBP17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 KLHDC7AQ5VTJ3 777 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 ZNF720Q7Z2F6 126 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 FAM186BQ8IYM0 893 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 DAW1Q8N136 415 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 EDEM3Q9BZQ6 932 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 CNOT7Q9UIV1 285 aaKnown RBP17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 RAB21Q9UL25 225 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 SNX12Q9UMY4 172 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 JRKLQ9Y4A0 524 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 RIPK3Q9Y572 518 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.39
CNKSR1-202ENST00000374253 ATP9AO75110 1047 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 KLRC1P26715 233 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 GYS2P54840 703 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 FER1L6Q2WGJ9 1857 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 PADI6Q6TGC4 694 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 SLC38A10Q9HBR0 1119 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 CTDP1Q9Y5B0 961 aaPredicted RBP17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 FTCDO95954 541 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 MTMR1Q13613 665 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 TNIP1Q15025 636 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 B3GNT9Q6UX72 402 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 ZNF571Q7Z3V5 609 aaPredicted RBP17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 ATG4CQ96DT6 458 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 GOLPH3Q9H4A6 298 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 PCIF1Q9H4Z3 704 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 ZHX2Q9Y6X8 837 aa17.51■□□□□ 0.39
CNKSR1-202ENST00000374253 ANO9A1A5B4 782 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 TESPA1A2RU30 521 aaPredicted RBP17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 DMTNQ08495 405 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 PRKG1Q13976 671 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms