RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 EXOC3L4Q17RC7 722 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 WDR93Q6P2C0 686 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 HDXQ7Z353 690 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 SLC35C1Q96A29 364 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 RPGRIP1Q96KN7 1286 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 NACC1Q96RE7 527 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 PARVGQ9HBI0 331 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 FRMPD4Q14CM0 1322 aa20.56■□□□□ 0.88
USP49-202ENST00000373010 UCHL3P15374 230 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 CXCR5P32302 372 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 SETQ01105 290 aaPredicted RBP20.55■□□□□ 0.88
USP49-202ENST00000373010 EPHA7Q15375 998 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 KLHDC7AQ5VTJ3 777 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 CPXCR1Q8N123 301 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 LXNQ9BS40 222 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 VPS33BQ9H267 617 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 ADAMTS1Q9UHI8 967 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 EIF3DO15371 548 aaKnown RBP eCLIP20.55■□□□□ 0.88
USP49-202ENST00000373010 SLC16A3O15427 465 aaKnown RBP20.55■□□□□ 0.88
USP49-202ENST00000373010 SLC18A3Q16572 532 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 B3GNT9Q6UX72 402 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 CLEC4DQ8WXI8 215 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 NOX5Q96PH1 765 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 FIZ1Q96SL8 496 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 OSBPL9Q96SU4 736 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 METTL14Q9HCE5 456 aaKnown RBP20.55■□□□□ 0.88
USP49-202ENST00000373010 PLCB1Q9NQ66 1216 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 AJAP1Q9UKB5 411 aaPredicted RBP20.55■□□□□ 0.88
USP49-202ENST00000373010 MYH11P35749 1972 aa20.55■□□□□ 0.88
USP49-202ENST00000373010 H3BQF6 201 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 ZMYND10O75800 440 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 PACSIN1Q9BY11 444 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 GBP3Q9H0R5 595 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 SMARCAL1Q9NZC9 954 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 FER1L6Q2WGJ9 1857 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 TUBBP07437 444 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 SPAG5Q96R06 1193 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 HOMER2Q9NSB8 354 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 EHD2Q9NZN4 543 aa20.54■□□□□ 0.88
USP49-202ENST00000373010 ZHX1Q9UKY1 873 aaPredicted RBP20.54■□□□□ 0.88
USP49-202ENST00000373010 KLRC1P26715 233 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 ZNF720Q7Z2F6 126 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 IRF2BP2Q7Z5L9 587 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 TXLNBQ8N3L3 684 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 PRPF38AQ8NAV1 312 aaKnown RBP20.53■□□□□ 0.88
USP49-202ENST00000373010 TLR10Q9BXR5 811 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 SIX2Q9NPC8 291 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 HYOU1Q9Y4L1 999 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 ALAS1P13196 640 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 PRLRP16471 622 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 ZNF131P52739 623 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 PTK2Q05397 1052 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 ODR4Q5SWX8 454 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 GJB7Q6PEY0 223 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 FAM178BQ8IXR5 827 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 RNF10Q8N5U6 811 aaKnown RBP20.53■□□□□ 0.88
USP49-202ENST00000373010 RBM46Q8TBY0 533 aaKnown RBP20.53■□□□□ 0.88
USP49-202ENST00000373010 BORCS6Q96GS4 357 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 TEPSINQ96N21 525 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 RAVER2Q9HCJ3 691 aaKnown RBP20.53■□□□□ 0.88
USP49-202ENST00000373010 PDE11AQ9HCR9 933 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 KCNH7Q9NS40 1196 aa20.53■□□□□ 0.88
USP49-202ENST00000373010 ARHGEF35A5YM69 484 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 MUTP22033 750 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 CASP8Q14790 479 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 GBP6Q6ZN66 633 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 ZNF571Q7Z3V5 609 aaPredicted RBP20.52■□□□□ 0.88
USP49-202ENST00000373010 FAM186BQ8IYM0 893 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 RIT2Q99578 217 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 GCNT4Q9P109 453 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 PIM2Q9P1W9 311 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 RPTORQ8N122 1335 aa20.52■□□□□ 0.88
USP49-202ENST00000373010 NAB2Q15742 525 aa20.52■□□□□ 0.87
USP49-202ENST00000373010 KIAA0753Q2KHM9 967 aa20.52■□□□□ 0.87
USP49-202ENST00000373010 MUM1L1Q5H9M0 696 aa20.52■□□□□ 0.87
USP49-202ENST00000373010 MIER3Q7Z3K6 550 aa20.52■□□□□ 0.87
USP49-202ENST00000373010 HINFPQ9BQA5 517 aa20.52■□□□□ 0.87
USP49-202ENST00000373010 WDR46O15213 610 aaKnown RBP20.51■□□□□ 0.87
USP49-202ENST00000373010 HIP1RO75146 1068 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 PALMO75781 387 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 TCP1P17987 556 aaKnown RBP20.51■□□□□ 0.87
USP49-202ENST00000373010 PSMC2P35998 433 aaKnown RBP20.51■□□□□ 0.87
USP49-202ENST00000373010 MAEAQ7L5Y9 396 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 LUC7LQ9NQ29 371 aaKnown RBP20.51■□□□□ 0.87
USP49-202ENST00000373010 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
USP49-202ENST00000373010 TARSL2A2RTX5 802 aaKnown RBP20.51■□□□□ 0.87
USP49-202ENST00000373010 CYP2J2P51589 502 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 MAPK7Q13164 816 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 PLS1Q14651 629 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 DNAAF5Q86Y56 855 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 DAW1Q8N136 415 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 JDP2Q8WYK2 163 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 SEL1LQ9UBV2 794 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 ODF2LQ9ULJ1 636 aa20.51■□□□□ 0.87
USP49-202ENST00000373010 LRRIQ3A6PVS8 624 aaPredicted RBP20.5■□□□□ 0.87
USP49-202ENST00000373010 DHX15O43143 795 aaKnown RBP20.5■□□□□ 0.87
USP49-202ENST00000373010 MATR3P43243 847 aaKnown RBP eCLIP20.5■□□□□ 0.87
USP49-202ENST00000373010 ITGB3BPQ13352 177 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms