RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
USF1-203ENST00000368021 ZNF75DP51815 510 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 SOX10P56693 466 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 COASYQ13057 564 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 GIT2Q14161 759 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 NEDD9Q14511 834 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 ZNF792Q3KQV3 632 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 SEPT14Q6ZU15 432 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
USF1-203ENST00000368021 TRMT44Q8IYL2 757 aaKnown RBP13.38□□□□□ -0.27
USF1-203ENST00000368021 KIAA0895Q8NCT3 520 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 NELFBQ8WX92 580 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 MRFAP1L1Q96HT8 127 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 ZNF333Q96JL9 665 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 CTNND2Q9UQB3 1225 aa13.38□□□□□ -0.27
USF1-203ENST00000368021 PLXNA1Q9UIW2 1896 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 PSAPP07602 524 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 CDC25BP30305 580 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 SP2Q02086 613 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 FAM26FQ5R3K3 315 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 FOXR2Q6PJQ5 311 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 C1orf186Q6ZWK4 172 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 GUF1Q8N442 669 aaKnown RBP13.37□□□□□ -0.27
USF1-203ENST00000368021 MYRIPQ8NFW9 859 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 ARMC5Q96C12 935 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 APBA2Q99767 749 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 REEP2Q9BRK0 252 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 DIS3Q9Y2L1 958 aaKnown RBP13.37□□□□□ -0.27
USF1-203ENST00000368021 ZKSCAN5Q9Y2L8 839 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 ZNF236Q9UL36 1845 aa13.37□□□□□ -0.27
USF1-203ENST00000368021 BICDL2A1A5D9 508 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ATG7O95352 703 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 XRCC5P13010 732 aaKnown RBP13.36□□□□□ -0.27
USF1-203ENST00000368021 UBA1P22314 1058 aaKnown RBP13.36□□□□□ -0.27
USF1-203ENST00000368021 CYP2C19P33261 490 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ACTR2P61160 394 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ATP6V0A1Q93050 837 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 RUSC1Q9BVN2 902 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 SLC39A2Q9NP94 309 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ODF2LQ9ULJ1 636 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 MAPK8IP1Q9UQF2 711 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 PCDHA2Q9Y5H9 948 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 DOCK5Q9H7D0 1870 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 MCM3APO60318 1980 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ZBTB39O15060 712 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 HMGCRP04035 888 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ATP1A3P13637 1013 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 GAP43P17677 238 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 CCNE1P24864 410 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 GUCY2CP25092 1073 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
USF1-203ENST00000368021 RARRES1P49788 294 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 STX17P56962 302 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 HERC4Q5GLZ8 1057 aaPredicted RBP13.36□□□□□ -0.27
USF1-203ENST00000368021 CDKAL1Q5VV42 579 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 RNF208Q9H0X6 261 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 ANKEF1Q9NU02 776 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
USF1-203ENST00000368021 CLGNO14967 610 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
USF1-203ENST00000368021 FARP2O94887 1054 aaPredicted RBP13.35□□□□□ -0.27
USF1-203ENST00000368021 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
USF1-203ENST00000368021 FANCCQ00597 558 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 UGCGQ16739 394 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 TTI2Q6NXR4 508 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 METTL7BQ6UX53 244 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 ARMCX2Q7L311 632 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 P2RX5Q93086 422 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 HPS3Q969F9 1004 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 TIPINQ9BVW5 301 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 UNC93B1Q9H1C4 597 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 OLFML3Q9NRN5 406 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 SEL1LQ9UBV2 794 aa13.35□□□□□ -0.27
USF1-203ENST00000368021 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
USF1-203ENST00000368021 MYH9P35579 1960 aaKnown RBP13.35□□□□□ -0.27
USF1-203ENST00000368021 SYNGAP1Q96PV0 1343 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 IGSF9BQ9UPX0 1349 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 HOXC6P09630 235 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 SUPT20HL2P0C7V6 817 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 CCL5P13501 91 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 ZNF131P52739 623 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 RAD51AP2Q09MP3 1159 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 TPD52L1Q16890 204 aaPredicted RBP13.34□□□□□ -0.27
USF1-203ENST00000368021 PRAMEF19Q5SWL8 479 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 CCDC62Q6P9F0 684 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 MYOCDQ8IZQ8 938 aa13.34□□□□□ -0.27
USF1-203ENST00000368021 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms